| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1458 |
|---|
| Symbol | |
|---|
| ID | 2741573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 1506349 |
|---|
| End bp | 1507878 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637160337 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_972064 |
|---|
| Protein GI | 42526966 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAC AAGTTAAATT ACACTCTTCA TATAACCCTC AAAAAGAAGC CGAAAGGTTT
TCCGATACAA TACAGGGAAA TCCTAAAATT ATCGTTATCA CGGAACCCGG AGAATCTTAC
CTTGCATCGG CTTTACGTAA AAAATTTCCT AAAGCTAAAT TGATGGCCAT GAGGTACACG
GACAATTATT TTTTGGAGTC GGATAAATTC TGGGATAGAG TTTGGAGACC GGCTTCAGGG
AATCCGTCTT TTTTTTTGGT CAATAATATT CCGGATGAAT TTTTATCGTC TACTTTGTTT
TTACCTTGGA AGCCGGCAGA AAAAGTTTGG CCTGATTCGG CTTCTTGGGT ATGGAAGGAG
ATATCCGAAG CCGTAAAAAT AATACAGAGC CTGATAGCGA CAAGAAGTTT TTTTGGAAAA
AGATGGCTTA AAAATATGGG CGATAATTTT ATCTTTACCG AAAAACCCGT CAATCTCGAT
TTTTTTGGTG AAAATAATAT TGAAAATAAC GAACCCTCTT TTTTTGCAGG GGCCGGCCCT
AGTTTAGATG AGGTCTTGGA TAATTACTCT GACAATATAA ACGAAATATT TAACATGGCA
GCGGCTTCAG CCCTGCCTGC CGTCTTAAGC CGTAATATAA AGCTTGATCT ATGTGTATCG
ACTGACGGGG GATTTTGGGC GGCAAATCAC TTAAAATATT TAAAGGATGA AAAATTTAAA
GAGACTGCCC TAGCCTTCCC GTTGGAAGCA AAAATTCCTT ATCAGATTCT AAAAAACAAT
AACTGTCTTT TTTTAAGCTA CGGCTCAAGC CTTGAAAATC TTTTTTTTAC AAACTTAGGT
ATTACTCCAA TTCCGGCAAA AAGAAACGGA ACGGTGTCCG GTACAGCAAT AGAACTTCTC
TTAGACGAGG CCGGAGGAAA AATCTTTATT GCAGGCTTGG ATTTAAAGGA ATCAAAGGGC
TTTTCCCATT GTTCTCCCCA TGAAAGTCAA ATACAAAAAG AAATTAAAGC AAACCGCTTA
GATACTCTAT CCACTTTTGC AGCTATATCG AATTTTGATC TGCGCTCCTT AAAAACTTAC
GAAAAATGGT TCAGCCGAAT ACCCGTGCCG AGGGCTGAAA GACTTTTTAG GATAGGAAAA
GACCTTCCAC CTTTAGGGAA TATAAAATCA ATAGACGGGG AAGATTTTAA GGCTCAAACA
AGAGGTCGAG AAAACACAAA TAAAAAAACT ATTCAGGTAA GGCGACTAGA ACACAAAACT
CCTAAAGAAA AAAAAGCCAT GCTTTCCGCA ATTTACCAAA ACATAAAAGA GGAAATAAAA
AACAAGACTT TTTTTGATAA AATAAAAATA AGTGCAAAGG AAAAAGAATT AAGCAGTCCT
GAAAAAGAAT TATGTGAATT TATTTCTTTT CAAAATTATA TGACATTTTT AAAAGAAAAA
GATAGTCACA ATGAAGCGGA AATTAAACTA AAACTTGAAG ATGAAATAAG CTCCTTTTTA
GAAAATCAAA TTGGAAGGCT TAAACCATGA
|
|---|
| Protein sequence | MIKQVKLHSS YNPQKEAERF SDTIQGNPKI IVITEPGESY LASALRKKFP KAKLMAMRYT
DNYFLESDKF WDRVWRPASG NPSFFLVNNI PDEFLSSTLF LPWKPAEKVW PDSASWVWKE
ISEAVKIIQS LIATRSFFGK RWLKNMGDNF IFTEKPVNLD FFGENNIENN EPSFFAGAGP
SLDEVLDNYS DNINEIFNMA AASALPAVLS RNIKLDLCVS TDGGFWAANH LKYLKDEKFK
ETALAFPLEA KIPYQILKNN NCLFLSYGSS LENLFFTNLG ITPIPAKRNG TVSGTAIELL
LDEAGGKIFI AGLDLKESKG FSHCSPHESQ IQKEIKANRL DTLSTFAAIS NFDLRSLKTY
EKWFSRIPVP RAERLFRIGK DLPPLGNIKS IDGEDFKAQT RGRENTNKKT IQVRRLEHKT
PKEKKAMLSA IYQNIKEEIK NKTFFDKIKI SAKEKELSSP EKELCEFISF QNYMTFLKEK
DSHNEAEIKL KLEDEISSFL ENQIGRLKP
|
|---|
| |