| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1453 |
|---|
| Symbol | |
|---|
| ID | 2741416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | + |
|---|
| Start bp | 1499252 |
|---|
| End bp | 1501576 |
|---|
| Gene Length | 2325 bp |
|---|
| Protein Length | 774 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637160332 |
|---|
| Product | alpha-galactosidase |
|---|
| Protein accession | NP_972059 |
|---|
| Protein GI | 42526961 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3345] Alpha-galactosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCAAT TTGAAGATGA TGTTTTTTAT CTGGAAACCG AGAACTCAAG CTATTGGTTC
CGTATAAGTC CTTACGGCCA CTTGGAAACC GTGCATTACG GTAAAAAGAT GGAAAGAGGC
GATATACAGG GTCTCCTTGT AAAAAGAACG GCACAGACAG GTTCTTCCGT TTGCTATGAT
GAAAAAGCCC CCCTATATGT GCTTGATAAT ATCCCCTTGC AATGGTCGGG AAATGGCAGG
GGGGATTACC GTTATTCTCC TTGCGAAATA AGAATGCCCG ATTCTTCTTT TACGCACGAT
TTTGTTTATC AATCCCATAA GATAGAAAAG GGCTTGAAAC CTATGCAGAC TCTTCCTTAC
GCCATTGACG GAAATGAAGA CGCCGAAACC CTTATCATAA ATTTAAAAGA TATAAACGAT
GTTAGTCTTG CACTCTACTA TACGGTATTT CCGTCCTTTA ATCTTATAAC AAGGCGTGCT
GTCTTGACAA ATAATAATGA AAAAGCCTTG GAAATACGCC GCCTTATGAG TATGATGATA
GATCTTCCGG ACAGGGGCTT CGATATGTTC ACCCTTGACG GAAGCTGGAT TAAAGAAGCT
CATCTCCACA AAAAAGAAAT TTCCTATGGG ATGTGGGTAA ACGAGTCTAC AACCGGAGCA
AGCTCTAACC GTCACAATCC GGGTTTTCTT GTTGCAGCTC ACGGAGCAGA GGAGGATAGG
GGAGAGGTCT ACGGGTTCAA CCTTATCTAC AGCGGCAATC ATTTAGGATT TGTTCAAAAA
AGTCATTTGG ACTTAATCCG CATCGGTATC GGGATAAGTC CTCATTGTTT TTCTTGGGAT
TTAAAAAAAG GTGAAAGCTT TGAAACGCCT GAGGCTCTTC TTTCTTTTTC CGATAGGGGA
TTTAACGGGC TTCGTTCAAA TATGCACGGC TTTATAAATA AGTGTATTGT AAGGGGTGAA
TGGAAAGAAA AAGAAAGGCC TGTTTTAATA AACAATTGGG AAGCCGATTT TTTTAAGTTT
AACCGCCGAA GCCTTTTACG CTCTGCCCGT CAGGCAAAAA AACTAGGGCT TGAGCTTTTT
GTGCTTGATG ACGGCTGGTT CGGAGACCGG AATAACGATA GTGCAGGCCT CGGCGACTAT
CGGGTAAATA CAAAAAAGCT CCCCGGCGGA ATTAAAAAAC TTGCCGACAG GGTGCGTAAA
ATAGGGCTTG ACTTCGGGCT TTGGTTTGAG CCTGAAATGG TAAACGAGGA CAGCGATCTA
TTCCGTTCTC ATCCCGAGTG GGCCTTAAAA GAGCCCTTCA GGGAGCCGGT CAGAGGAAGG
CATCAGCTCG TCCTTGACCT TTGTCTTAAA GAAGTGAGGA ATTATATAGT TGAAAATGTT
TCACGGATTT TAGATGAGGC GGATGTCTCT TATGTAAAAT GGGATATGAA CCGTCACATA
TCGGCAGCTT TTTCTCCTTC TTTAAAAAAT CAAGGAGAGT TTTATCACCG ATATATTTTA
GGCCTTTATG AAGTCTTAAG GAGGATTTTT TCTCCTCGGC CTCATATCCT GCTTGAAAGT
TGTTCTTCAG GAGGAAACCG TTTTGATCTT GGAATGCTTT GCTTTTCTCC CCAGATATGG
ACTTCGGATA ATACCGACCC TGTGGAAAGG CAGGAAATAC AAAGCTCTTT AAGTCTCCTA
TATCCGCTTT CTACTATGGG TGCCCATGTT TCGGCCTCGC CTCATCAGCA GACCCTAAGG
CAAACATCCT TGAGTACCCG CTTTAATACC GCCTGTTTCG GGGTCTTAGG TTATGAATTG
GATCTAAAAT TTTTAACCCA TGCCGAAAAA AAAGAAATAA AAGAACAAAT TTCTTTTTAT
AAAAAATACA GAAAAATTTT TCAGTTCGGT TCTTTTTCGG TTATAGGTAC TCATAAAGAT
AATCAGAGGC ATTGGCAATG TTCTGACGGC AGGACTGCCG TATCAGGCCT TTTTCAGATG
AAGGCACGGA CTGCCGACGG GCACAGTATT TTAAAAGTTA AAGGAATGAA GGAAAATGCC
TTATACGAGG TTGAAACAAA ACCTCAAAGC CTCTATATAA AGCGTTTCGG AGGTTTGATT
AAACATGTGC TTCCCATTTC TTTAAATCCT GAGGGACTTG TTTTAAGAAC GGTAAACAAG
TATTATGCTC TTTTAGATTG TGTAGAAAAA TATCGAGCTT CAGGAAAGCT GTTGGACTAC
GGTATTCTTT TAAATAATCA GTTTATGGGC ACTTATTATA ATGATAAGAC TCATCTTTGG
GGAGACTTCG GTTCCTGTTT ATTTGTAACG AAGGAGGTCA TTTAA
|
|---|
| Protein sequence | MIQFEDDVFY LETENSSYWF RISPYGHLET VHYGKKMERG DIQGLLVKRT AQTGSSVCYD
EKAPLYVLDN IPLQWSGNGR GDYRYSPCEI RMPDSSFTHD FVYQSHKIEK GLKPMQTLPY
AIDGNEDAET LIINLKDIND VSLALYYTVF PSFNLITRRA VLTNNNEKAL EIRRLMSMMI
DLPDRGFDMF TLDGSWIKEA HLHKKEISYG MWVNESTTGA SSNRHNPGFL VAAHGAEEDR
GEVYGFNLIY SGNHLGFVQK SHLDLIRIGI GISPHCFSWD LKKGESFETP EALLSFSDRG
FNGLRSNMHG FINKCIVRGE WKEKERPVLI NNWEADFFKF NRRSLLRSAR QAKKLGLELF
VLDDGWFGDR NNDSAGLGDY RVNTKKLPGG IKKLADRVRK IGLDFGLWFE PEMVNEDSDL
FRSHPEWALK EPFREPVRGR HQLVLDLCLK EVRNYIVENV SRILDEADVS YVKWDMNRHI
SAAFSPSLKN QGEFYHRYIL GLYEVLRRIF SPRPHILLES CSSGGNRFDL GMLCFSPQIW
TSDNTDPVER QEIQSSLSLL YPLSTMGAHV SASPHQQTLR QTSLSTRFNT ACFGVLGYEL
DLKFLTHAEK KEIKEQISFY KKYRKIFQFG SFSVIGTHKD NQRHWQCSDG RTAVSGLFQM
KARTADGHSI LKVKGMKENA LYEVETKPQS LYIKRFGGLI KHVLPISLNP EGLVLRTVNK
YYALLDCVEK YRASGKLLDY GILLNNQFMG TYYNDKTHLW GDFGSCLFVT KEVI
|
|---|
| |