| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1444 |
|---|
| Symbol | |
|---|
| ID | 2741407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 1489682 |
|---|
| End bp | 1491094 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637160323 |
|---|
| Product | metallo-beta-lactamase family protein |
|---|
| Protein accession | NP_972050 |
|---|
| Protein GI | 42526952 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATTA AATTTTACTC GCTAGGTGCT GCAGAAGAAG TTACCGGATC TAAACACATT
CTTGAAGTTG ACGGGCATAA ATATTTGATA GACTGCGGAG CTTTTCAAGG AAAAAGAGCA
GAAGCGGACA AGAAAAACAG GGATTTTAAT GTTCCGGCTC CTGAGCTGGA AGCCGTCATT
TTAACCCATG GTCATTATGA TCATTGCGGT TTATTACCCT TGCTGGGAAA GCATGGATTT
ACAGGCAACA TATATGCAAC CCCTGCCACC AGAGATATAG CAAACCTTGT TATGATGGAT
TCTGCACGAA TTCAAGCCAG AGATAGGGAG TATTTATCCA AACAAGCTGC AAAAAAAGGA
GAAACCTTTA AATGGGTGCC TCTTTTTGAT GAAGCCGATG TAATTCAAAC AGTCAACCAG
TTTGTAACAA TTTCATATCA TAGGCCTGCA TGGATAGGCC CCAATGTTCA ACTGGAATTC
TATGATGCAG GGCATATTTT AGGTTCAGCG ATGGCTGTAA TTACCGCCAA AGACTCGGAT
GGGAAAGAGG TAAAAATAGC CTTTACAGGA GACCTAGGCC GAAAAAATAA GGCTATTATC
CGCGATCCTG ACATTATTCC TCCTGTAGAT TATATAGTTA TTGAAAGCAC ATACGGAAAC
CGGCGCCACG AGGAAACCGA TAATGCTTTA AAACTTCTTG CCGAAAAAAC ACAGGAAATT
GTACAAAATA AGGGAAAGAT GATTATTCCC GCCTTTGCCG TTGAAAGGAC TCAGGAAATC
GTCTATTATT TTCACCTCTT AGTCGATAAA AGAATAATTC CCGATATTCC GATTTATGTA
GATTCTCCCA TGGCCGTAAA CGCAACGAGT ATATTTCAGG TACATCCCGA ATGCTATGAT
GCACAAACAC ATGAGGCCTT TTTAATTCAT CATAAAAATC CTTTCGGCTT TAACTCGCTC
AAATTTATAA CCAGCGTAGC CGAGTCCAAG GAATTGAACA ATATTGACGG TCCCATGGTT
ATAATAAGTG CGGACGGAAT GTGCGAATTC GGACGAATTA CCCACCATCT TGCAAACAAT
ATCGAAAAGC CATCGACAAA GGTGCTGCTG GTAGGTTTTA TGGCAGAAGA TACTCTCGGC
CGTAGACTCC AAAACAAAGA ACAAGAAGTA AAAATTTTCG GTGAATGGCA TCAGGTACGG
GCTGAAATTT TGCAGATAAA CGCCTTCAGT GCTCATGCCG ACTATTTTGA GTCCAGAGAG
TGGCTGGACT CCTTGAAGAA TCCTAAACTT AAAACGATAT TCTTGGTTCA CGGAGAGCCT
AAGGCTCAAA CTTATTTTAC CCAATACTTA AACGAAAACG GTTATAATGA TGTAAAAACG
GTAAAATACG GAAGAACATA CAAATTGGAC TAG
|
|---|
| Protein sequence | MAIKFYSLGA AEEVTGSKHI LEVDGHKYLI DCGAFQGKRA EADKKNRDFN VPAPELEAVI
LTHGHYDHCG LLPLLGKHGF TGNIYATPAT RDIANLVMMD SARIQARDRE YLSKQAAKKG
ETFKWVPLFD EADVIQTVNQ FVTISYHRPA WIGPNVQLEF YDAGHILGSA MAVITAKDSD
GKEVKIAFTG DLGRKNKAII RDPDIIPPVD YIVIESTYGN RRHEETDNAL KLLAEKTQEI
VQNKGKMIIP AFAVERTQEI VYYFHLLVDK RIIPDIPIYV DSPMAVNATS IFQVHPECYD
AQTHEAFLIH HKNPFGFNSL KFITSVAESK ELNNIDGPMV IISADGMCEF GRITHHLANN
IEKPSTKVLL VGFMAEDTLG RRLQNKEQEV KIFGEWHQVR AEILQINAFS AHADYFESRE
WLDSLKNPKL KTIFLVHGEP KAQTYFTQYL NENGYNDVKT VKYGRTYKLD
|
|---|
| |