| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1443 |
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| Symbol | |
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| ID | 2741406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1488899 |
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| End bp | 1489675 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637160322 |
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| Product | RNA methyltransferase |
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| Protein accession | NP_972049 |
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| Protein GI | 42526951 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAA TAATTACTGG TTTTCATGCT ATAGACGAGA TTTTAAGAGC GGAAAAACTT
AAAATAGAAA AAGAAAAGAA CCGGAAGCCG AGCCTTGAAA TTTTTTACTC TAAAGAAGGA
CCAAGGGTAA AAAAAATTTT GGAAGCGGCT CGTAAATTGA ATCTAAAGAT TGAAAAAAAA
GACAATCAAT TTCTTGATTC CCTTACTAAA ACCTTGCCGG AACAGTTAAG GGATCACAGG
GGTATTGTTC TTGTAACTGA GGCTGAAAAT CAAAAAAAAG GAATGAGTGT AGATGAGTTT
TTTGCAAAAC TTGCAGAAAA AGGCTCGGCT TTTGTGGTAA TCCTCGACTC CGTTACTGAT
CCTCACAATA CGGGTTCCAT TATACGAAGT GCGGACCAGT TCGGAATAGA CGGAATAATA
GTTCCGGAAA ACAAAAGTGC GGGAGGCTTT GAGATTATAA GCAAGGTAAG CGCAGGAGCT
TTAGCCTGGG TTCCATTCGT GGAAGTAACC AATTTGGTAA GAACCGTAGA AAGGCTAAAA
AAGGAAGGCT TTTGGATTTA CGGGGCAGAT GCAGGAGGCA AGGCCCTACC CAATCTTACG
TTCCCAAAAA AGACAGTCCT TATTATGGGA AATGAAGGAA GGGGAATGAG CCGCCTTGTA
GAAGAAACCT GCGACGAAAT AGTGTCAATT CCGACAAAGG GAAAACTTGA CAGCCTAAAT
GTTTCCGTCG CAGCAGGCAT TCTATTATAC GAAATAAGCC GGAAAAAAGA GGTTTAA
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| Protein sequence | MKKIITGFHA IDEILRAEKL KIEKEKNRKP SLEIFYSKEG PRVKKILEAA RKLNLKIEKK
DNQFLDSLTK TLPEQLRDHR GIVLVTEAEN QKKGMSVDEF FAKLAEKGSA FVVILDSVTD
PHNTGSIIRS ADQFGIDGII VPENKSAGGF EIISKVSAGA LAWVPFVEVT NLVRTVERLK
KEGFWIYGAD AGGKALPNLT FPKKTVLIMG NEGRGMSRLV EETCDEIVSI PTKGKLDSLN
VSVAAGILLY EISRKKEV
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