Gene TDE1441 details

Gene Information

• Locus tag: TDE1441
• Symbol: rfbB
• ID: 2741404
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1486387
• End bp: 1487475
• Gene Length: 1089 bp
• Protein Length: 362 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637160320
• Product: dTDP-glucose 4,6-dehydratase
• Protein accession: NP_972047
• Protein GI: 42526949
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1088] dTDP-D-glucose 4,6-dehydratase
• TIGRFAM ID: [TIGR01181] dTDP-glucose 4,6-dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGAAGTT TACAAAATAT ACTGGTAACC GGCGGTGCGG GCTTTATAGG TTCTAATTTT 
ATCAGAACCT TATTAAAAAA AGAAGACGCA TTTACGGGTC GTATTATAAA TCTTGATGCT 
CTTACTTATG CAGGTAATGC CGCAAGCCTT GCCGATATGG AATCCGAATT CGGCGGAAGC 
CGATACTTTT TTATTCATGG AAATATCTGC GATAAAGAAA TTATAAATAG TATTTTTACG 
GAATATAATA TAGACACGGT TGTTCATTTT GCAGCTGAAA GTCATGTTGA CCGCTCTATT 
TTGGGTCCTG AGGTTTTTTT AAAGACAAAT GTTTTGGGAA CCTTTAACCT TTTGGAGACT 
GCAAAGCAAT TTTGGAAAAA ACCTGACGGA ACAATGCGTG ATGATGTTCT TTTTCACCAT 
ATCAGTACGG ATGAGGTTTA CGGTTCTTTG GGCACTGAAG GCTATTTTAA AGAAACTACA 
GCCTATGACC CTCGTTCTCC TTATTCTGCA AGCAAGGCAT CAAGCGATCA CTTGGTAAAA 
GCTTACTTCC ATACCTATGG GCTGCCTGCT ACTATTTCAA ACTGTTCCAA TAATTACGGG 
CCGTTTCAAT TCCCTGAAAA ATTGATTCCC CTTATGATTT TAAATATGCT TGAAGGTAAA 
AATCTTCCAG TTTACGGTGA CGGTAAGCAG ATTAGAGACT GGATACATGT TGAAGACCAC 
AATGAAGCTG TAAGGCTTAT ACTAAAAAAC GGGAGAGCGG GGAAGACCTA TAATATAGGC 
GGCGAAAATG AATGGGAAAA TATAAAGCTT TTAAATAAGC TCATTCAAAT CGTTTGCAAA 
AAGACAGGTC TTGAGGAAGA AAATGTAAGA AAAACTATTA CACATGTAAC CGATAGGCTT 
GGACATGACC GCCGCTATGC TATTGACTGT ACCAAGATAA AAAATGAACT TAATTGGAAG 
CGTAACTTTG ATTTTGAAAC CGGACTTGAA AATACTGTTG ACTGGTATTT AAATAATAAG 
AAATGGATAG AAAATGTCCG TTCCGGTGAG TACCGAAATT GGATAGAAAA AAATTATAAA 
GAGAGATAG 

 

Protein sequence

MRSLQNILVT GGAGFIGSNF IRTLLKKEDA FTGRIINLDA LTYAGNAASL ADMESEFGGS 
RYFFIHGNIC DKEIINSIFT EYNIDTVVHF AAESHVDRSI LGPEVFLKTN VLGTFNLLET 
AKQFWKKPDG TMRDDVLFHH ISTDEVYGSL GTEGYFKETT AYDPRSPYSA SKASSDHLVK 
AYFHTYGLPA TISNCSNNYG PFQFPEKLIP LMILNMLEGK NLPVYGDGKQ IRDWIHVEDH 
NEAVRLILKN GRAGKTYNIG GENEWENIKL LNKLIQIVCK KTGLEEENVR KTITHVTDRL 
GHDRRYAIDC TKIKNELNWK RNFDFETGLE NTVDWYLNNK KWIENVRSGE YRNWIEKNYK 
ER