Gene TDE1430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1430 
Symbol 
ID2739707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1473570 
End bp1474571 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content29% 
IMG OID637160309 
Productbeta-1,4-galactosyltransferase, putative 
Protein accessionNP_972036 
Protein GI42526938 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGATT ATTTATTTTC GATTTGTATT CCTGTTTATA ATACGGAACA ATATTTGCCG 
CGTGCATTGG ATTCTATAGT AAATCAAACC TTTGATACAA AAAAAATAGA AACGGTTATT
GTCAACGACG GTTCACCTTG TTCAGAGGAG TGTGATCAAA TAATAGCGGA ATATTCAAGC
CGCTTATCAA TACAATATAT CGTGAAAAAT ATAAATGAAG GACTTTTTTT AGCCCGCAAA
ACTGCTGTTG AGAAAGCGGC TGGGAAATAT ATTTTATTTT TGGATGCAGA TGATTCATTA
GAAGTGCATA GTTTACGAAT TCTGTCTGAT AGTCTTATCG ATGAACCGGA TTATGTACAG
TTTAGGATAT ATAATGTACT GGGTTGTGAA AAATCGCTTT ACCATTCAGT TTTAGAAGAT
GAAACGCATA AAACTTTAGC AGATGTTTTG CAGAATAAAG CTATACATAA TCTTGTTAAT
AAGTGCTATA ACGCGCAACT TTTAAAACGA ATTTACGATA CAATTTCCAA TTCTTATGCA
GTTTATGCGG AAGACTACTA TCAATCAGTG ATTATAGAAT ATTTTTCGAA CAAGAAAAAA
TTTATTGATA TTCCGCTTTA TAATTATTTT CGATATATTG GTATTACATC AAATAATACT
TTTAGTAACC GAGAGAAACT CATACGCATC ATTGAAAGTT TTCAAAATAT TGAAAAAAAT
CTTGTTTCAT TTTTTGAAAA AAATAATGAA CAACAATATG TACAATATGT AAAAGATTAT
ATTAGGGAAC TATATATTAA TTTTGCGTAT TGGACTAATT CACTACATAG TATTATGTTC
GTAATAAGAC AATTGCCTAA TGAATATCAT GCTATTAGAT TAACGATATT CAAGAGATTC
CTTATGCATA ATATTAAACA GCTTATCAAG AATATCTTAC CGTATGGATT TGTGTGTTTA
ATAGTTGCAC GGAAGAATAA AGTATGTATT TCTAGTAACT GA
 
Protein sequence
MYDYLFSICI PVYNTEQYLP RALDSIVNQT FDTKKIETVI VNDGSPCSEE CDQIIAEYSS 
RLSIQYIVKN INEGLFLARK TAVEKAAGKY ILFLDADDSL EVHSLRILSD SLIDEPDYVQ
FRIYNVLGCE KSLYHSVLED ETHKTLADVL QNKAIHNLVN KCYNAQLLKR IYDTISNSYA
VYAEDYYQSV IIEYFSNKKK FIDIPLYNYF RYIGITSNNT FSNREKLIRI IESFQNIEKN
LVSFFEKNNE QQYVQYVKDY IRELYINFAY WTNSLHSIMF VIRQLPNEYH AIRLTIFKRF
LMHNIKQLIK NILPYGFVCL IVARKNKVCI SSN