| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1414 |
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| Symbol | |
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| ID | 2739691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1456952 |
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| End bp | 1458088 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637160293 |
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| Product | phosphonopyruvate decarboxylase, putative |
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| Protein accession | NP_972020 |
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| Protein GI | 42526922 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR03297] phosphonopyruvate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAAGAC CTCAGTTTTT TTATGAGCTG TTAAAAGAAA ACGGAACCGA CTTTTTTACC
GGTGTTCCCG ATTCCCTTTT AAAAAGCTTT TGTGCTTATA TTACCGATAA TGTAGAAGGT
AAAAATCATA TTATCGCAGC AAATGAAGGT TGTGCCGTAG GACTTGCCGC AGGACATTAT
TTTGCAACAG GAAGGGTTCC TCTTGTTTAT ATGCAGAATT CCGGTTTAGG GAACACGGTC
AATCCCTTGC TTTCGCTTGC AGACAGAGAA GTATATTCAG TTCCTCTGCT GCTGGTAATC
GGCTGGCGCG GGGAACCTAA TGTGCATGAT GAGCCTCAGC ATATAAAGCA GGGCAGGGTT
ACTTGTTCCC TCCTTGATGC AATGGAAATT CCCTATTGTA TTCTTTCGGA TGAAGAAGCT
GAGGCAAGAG CTCAGCTTGA AAAGGCTTAC TCTCATATAA AAGCTTCAAG TTCTCCTTAC
GCAGTTGTAG TGCGTAAAGG AATTTTTGAT TCTTATAAGT TAAAAACAAA TGAAGCTGTT
CCTGCCGAGA TGAGCCGCGA GGAAGCAATC GAAAAAATAA TATTAAATGC TCCTTCAAAT
GCTTGTTTTG TATCTACCAC AGGAATGGCT TCGCGGGAAC TTTATGAGCT CCGTGATAAA
CACGGCCAAG GTCATGCCAA AGATTTTTTA ACTGTCGGCT CTATGGGTCA TGCTTCACAA
ATTGCTCTAG GTATTGCTTT GAGTAAACCC GGTAAAAAGA TATTTTGCAT AGATGGAGAC
GGAGCTGCTA TTATGCACTT GGGGGGGCTG ACAGCAATAG GTTCACAAAG GCCAAAAAAT
ATGGTGCACA TCATTTTAAA TAACGGTGCA CATGATTCGG TTGGAGGACA GCCCACTGTC
GGAAGAAAAA TAAATCTTTG CAGTATCGCT TTTGCCTGCG GTTACACTAA GGTGGTATCG
GTTAAAACCA TTAAAGAACT TGAAACTCAG CTAAAAGATT TATCTTCAGC TGAAGGATCT
TTTCTTATCG AAGTGTTGGT GTCAAAGGGA GCAAGAGCGG ATTTAGGAAG ACCTAAATCA
TCGCCTATCG AAAACAAAAG AGCATTTATG GAATTTTTGG AGGAGAAACA TGATTAA
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| Protein sequence | MIRPQFFYEL LKENGTDFFT GVPDSLLKSF CAYITDNVEG KNHIIAANEG CAVGLAAGHY
FATGRVPLVY MQNSGLGNTV NPLLSLADRE VYSVPLLLVI GWRGEPNVHD EPQHIKQGRV
TCSLLDAMEI PYCILSDEEA EARAQLEKAY SHIKASSSPY AVVVRKGIFD SYKLKTNEAV
PAEMSREEAI EKIILNAPSN ACFVSTTGMA SRELYELRDK HGQGHAKDFL TVGSMGHASQ
IALGIALSKP GKKIFCIDGD GAAIMHLGGL TAIGSQRPKN MVHIILNNGA HDSVGGQPTV
GRKINLCSIA FACGYTKVVS VKTIKELETQ LKDLSSAEGS FLIEVLVSKG ARADLGRPKS
SPIENKRAFM EFLEEKHD
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