Gene TDE1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1406 
Symbol 
ID2741273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp1448767 
End bp1449468 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content38% 
IMG OID637160285 
Producthypothetical protein 
Protein accessionNP_972012 
Protein GI42526914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0542297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATTC ATAACGTTAT GGAAGACTTG GTATATACCG AAGTCAACAA ACTATTTGAT 
GAAGCCGAAG AAAAAAAAGA AAGCTGGCTT ACATGCAGTT GTATGCAATG CAGAGTTGAC 
ACCATGTGCT ATGTACTCAA CCGGGTTAAA CCCCGCTATA TAAAATCGGG GAGAGGCCTC 
GCTCACTTTT TAAAATTCGA AAAAACGGAA AAAGTACAGA TTATGGCCGA TATTACAAGT 
TTGGTAATTG AAGGTATGCA CAGGGTTCTT TCTACAAAAA GGCCTCATGA CCATGAACCC 
ATATTCGAAA CCGAAAACAC ACCCGTTTTT AATTTTCCTG CCATAACAGG CAATATTTTA 
AACGGAAGCA ATTTTAGACC GATGGAAGAT GCTACGATAA GCCTTAAAAT GAACGGAGAG 
CTGGTATCCC AGATGAGCAT TCTTTGGGAT AATCCTTATA CAATATCGGA AAAGACACCC 
GGAGCTTATA CCTTTTGTCC CAAAGCAATT CCTGCAAAAA ATGCAGGAGA TAAGGAAAAG 
TTTATTTTTG TCCTTAAAGC TGAAAAAGAA GGCTTTGATC CGACTAACTT TTCATTCGAT 
ATTGAATTAA CGGCAGAAGA CATGGTAAAA TCTCCTTTGG ACTCTTCAAA TTTTTATCAA 
ATCAAAAATT TGTTCTTATG CGAACACAGT GAGGAAGAAT GA
 
Protein sequence
MIIHNVMEDL VYTEVNKLFD EAEEKKESWL TCSCMQCRVD TMCYVLNRVK PRYIKSGRGL 
AHFLKFEKTE KVQIMADITS LVIEGMHRVL STKRPHDHEP IFETENTPVF NFPAITGNIL 
NGSNFRPMED ATISLKMNGE LVSQMSILWD NPYTISEKTP GAYTFCPKAI PAKNAGDKEK 
FIFVLKAEKE GFDPTNFSFD IELTAEDMVK SPLDSSNFYQ IKNLFLCEHS EEE