Gene TDE1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1402 
Symbol 
ID2741269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1443298 
End bp1444575 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content40% 
IMG OID637160281 
Producthypothetical protein 
Protein accessionNP_972008 
Protein GI42526910 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAGG TTCAAAATTA TATACCCCGT GCTGTAGATG ATAAAATAGA TTTATATTTG 
ACTCTTTTTG GAGCTGTCTG CATCGAAGGG CCTAAATGGT GTGGTAAAAC ATGGTCATCA
GCCTATCACA GTAAAAGCTC TTTTTACCTA GGTTCACCTC AAGGCTCTTT TCAAAATCGA
AAAATGGCCG AGATGACACC CGATATTGTC CTTTTGGGTG AAACACCCCG TCTTATAGAT
GAATGGCAGG ATGTTCCTCT TTTATGGGAT GCTGTACGTT TTGAAGTGGA TAAGAGGGGC
AAAAAAGGTC AATTTATACT TACCGGTTCC GCCACACCTA ATCATAAAGG GATTTTGCAC
AGCGGTGCGG GGCGGATAGG CAGATTGAGG ATGAGGCCTA TGTCTTTGTA TGAGTCAAAG
GATTCTACAG GGGAGGTTTC GCTAAAGGCT ATTTGTGAGG GCTCATCTTG TTCTTCTCCG
ATAAAAGAAG TCAGCCTGCT TGATATTATA AATTTAATAA TCAGAGGCGG TTGGCCTGCA
AATGTAGGTT ATAGTGCTAA AAATTCATCA AAAACGGCAG CAGAATATCT CCATGCTATT
TTGTCAGATG ATGTGTTTAG GATTGACGGT ATAAAAAGAG ATGCATCAAA AATGAAGCTC
CTTCTTAAAT CCCTTGCCCG CAATGAAAGC AGTACGGCAT CGAACCGCAC CCTTAAAAAC
GATATCAGCT CAATAGATTA CGAAGATATT GATATAGAAA CTACTGCAAC TTATCTTAAT
ATCTTTGATC GCCTTTTTTT AACCGATAAT CAATTACCTT TCTCTCATAA TATTAGGTCT
TCCGTACGTA TCAAACAAAT GGAAAAAAGG CATCTTGCAG ACCCGTCTTT GGCTTGTGCC
TTACTTGGGG CCGGAGAAAA AACTCTTTTA TCCGATTTAT CAACATTGGG CTTCTTGTTT
GAGGCTCTAT GCGAAAGAGA CCTAAAAGTG TATGCCGATA CTTTTGATGC ATCGGTTTAT
CATTATCAAG ATTATAAAAA TCGGGAAATA GATGCCGTTA TAGAAATGAA GGACGGTTCT
TGGGCCGCAT TTGAAATTAA ACTTGGAGCA AATCAAATAG ATGAGGCTGC CGCAAATCTT
ATTAAGATAA GGGACAGTTT AAAAGCTGAA GGGGCCGGCT ATCCTAAGTT TATGGGTGTT
ATATGCGGCT TAGCAAATGC TGCTTACTGC CGTAAAGACG GGGTGTTTGT AATTCCGATA
ACTTCGTTAA AGTGGTAA
 
Protein sequence
MIKVQNYIPR AVDDKIDLYL TLFGAVCIEG PKWCGKTWSS AYHSKSSFYL GSPQGSFQNR 
KMAEMTPDIV LLGETPRLID EWQDVPLLWD AVRFEVDKRG KKGQFILTGS ATPNHKGILH
SGAGRIGRLR MRPMSLYESK DSTGEVSLKA ICEGSSCSSP IKEVSLLDII NLIIRGGWPA
NVGYSAKNSS KTAAEYLHAI LSDDVFRIDG IKRDASKMKL LLKSLARNES STASNRTLKN
DISSIDYEDI DIETTATYLN IFDRLFLTDN QLPFSHNIRS SVRIKQMEKR HLADPSLACA
LLGAGEKTLL SDLSTLGFLF EALCERDLKV YADTFDASVY HYQDYKNREI DAVIEMKDGS
WAAFEIKLGA NQIDEAAANL IKIRDSLKAE GAGYPKFMGV ICGLANAAYC RKDGVFVIPI
TSLKW