Gene TDE1399 details

Gene Information

• Locus tag: TDE1399
• Symbol: lgt
• ID: 2741266
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1439533
• End bp: 1440549
• Gene Length: 1017 bp
• Protein Length: 338 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637160278
• Product: prolipoprotein diacylglyceryl transferase
• Protein accession: NP_972005
• Protein GI: 42526907
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0682] Prolipoprotein diacylglyceryltransferase
• TIGRFAM ID: [TIGR00544] prolipoprotein diacylglyceryl transferase

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTTTAG CTATACAATA TCCTTCATGG CTCCATCCCG AAATTATTCC GGGGCTGCCG 
TTTTTACGTT GGTACGGCCT TATGTATCTT GTTGCCTTTG GAATAGCTTA TTTTTTATTT 
TCTTATCAGG TAAAGCATGG CGAATTTGAA CGATATTCCG GCTGTCAAAA GGCTATGACA 
CAAGATGATA TTTCAGACCT TTTTATCTGG GGAATTTTAG GGCTTATTTT GGGCGCGAGA 
ATTTTCGGAA CCCTGGTCTA TAATCCTGAA ACCTACTTAA AAGCTCCTTG GCTTATTTTT 
TGGCCATTTG CAAGGGATGG AGCCGGGAAT CTAACCTTTA CGGGCTTTCA AGGTATGTCC 
TATCACGGAG GCTTTATAGG AGGTTTTTTA GGGGTCATCC TCTGGACAAA AAAATCTAAA 
TTTAAATTTG CGGCAGTTGC AGACCTTATG GCTGTTTCAA TTCCTCTAGG CTACACATTC 
GGACGTCTCG GTAACTTTGC AAACGGTGAG CTTTACGGCC GCATAACGAC GAGTAAGATA 
GGAATGATTT TTCCTCAAAC TCCAATTTCT GACCGATTTT ATCTGGCCGA AAGTTGGGTC 
AGGGATTTTG CAGAACAAGC AGGTTTGCTT GTACAGGATG GAGCCTCTAT GATAAATCTG 
CCCCGCCACC CGAGCCAGCT CTATGAGGCC TTTTTTGAAG GGATTATTCT TTGGCTTATC 
TTATGGCTGC TTCGCAAGAA AAAGCCCTTT GACGGCTTTT TGGTTTGTGT TTATACATTG 
GGCTACGGCT TTTTTAGATT TTTTATCGAA TATTTCCGCC AGCCGGATGC CAATAAGGGC 
TACCCAATAT CCTTTGGGAC AGGGGCCGCC AATATTTATG TTTATGAATC GTGGAAAAAC 
ATATCTACCG GGCAAATTCT ATGTAGTTTG ATGATCTTAG CCTCTCTTGC TGCGATGTTA 
ATTCTTTATT TGCAAGAAAA AAAGTTAAAA GAAAAAAAAG GAAATATAGA TGGATAA 

 

Protein sequence

MLLAIQYPSW LHPEIIPGLP FLRWYGLMYL VAFGIAYFLF SYQVKHGEFE RYSGCQKAMT 
QDDISDLFIW GILGLILGAR IFGTLVYNPE TYLKAPWLIF WPFARDGAGN LTFTGFQGMS 
YHGGFIGGFL GVILWTKKSK FKFAAVADLM AVSIPLGYTF GRLGNFANGE LYGRITTSKI 
GMIFPQTPIS DRFYLAESWV RDFAEQAGLL VQDGASMINL PRHPSQLYEA FFEGIILWLI 
LWLLRKKKPF DGFLVCVYTL GYGFFRFFIE YFRQPDANKG YPISFGTGAA NIYVYESWKN 
ISTGQILCSL MILASLAAML ILYLQEKKLK EKKGNIDG