Gene TDE1395 details

Gene Information

• Locus tag: TDE1395
• ID: 2741262
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1433855
• End bp: 1435738
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637160274
• Product: glycosy hydrolase family protein
• Protein accession: NP_972001
• Protein GI: 42526903
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1449] Alpha-amylase/alpha-mannosidase

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAAAAGA ACAGTAAAAA AAAACTGGAG ATATGTTTTG CCGTTCATGC AGACTATAAC 
GTAATTGATG AGTTTTCAAA AGAAGATTAT ACTCAAGACT ACAAAGATTT TTTTTCAAGC 
TTATATGCTT CTCCTTCTAT TCCCTTTACT CTTGTCTTTA GCGGTAGATT TTTAGAATGG 
ATACAGCGTA AAAACCCCTC CTTTTTTGAT GTTATTTACG AAATGCACAA TAGAAAACAA 
GTCGAGATTT TGGGAAATGC TTTTTATGAG CCGTTTATCT CGATGATTCC TTCATCCGAC 
CTCATAGGGC AGATAGAGTA CATGACGGAT ACTTTGCGTA AACATTCTTA TAAGAGGCCC 
CGCGGTATGT ATCTGCCCTA TTTTGCATGG AATCCCAATA TCCTTCCCAA TTTACAAAAA 
TGCGGAATGG AGTATTGCCT TCTTGATTTC CGCTTTTTTA TTAAGGCCGG CTTAAATGCT 
TTTGCTCCGG TTTGTATGGA AGACGGCGGA AAAATATTAT TCGGTATTCC TTCTACTTAT 
GAATTTGAAA ATACCGATTT GCAGCCGGCA GCCTTTTATG ACTTATTATG TAATTATGCA 
AGTGTGGTTA CCGAAACAAG CGTTGTCGTC TTCTTATCCG GAGAAACAGC AGTTCGATTT 
TTAGATAAAT CAAAGGGCAA AAAATCGTGG ATGGAGGAAT TTCTTGAACG TATTTCATCT 
CCCGACTCCG TTATTTCGCT CACTCATACC GGACAAATAA TTAAAAATAA AAGAATATAT 
CAAAAAGGCT TTATATCCTC AAATGCAATA TTTTCAAATC AACTTGTAAA CAGCTCCGTA 
AAACAGCTTC TAGCCAATAA ACCCAATGTC TATGCCATGT ATGCAAAGAT GATCTATGTC 
CATAGTCTTG TAAACCAGGT GCGTGGTGAT AAGGCCCGCA AAAATAATTC CTCATTGGAT 
TTGTGGAAGG CTGAAAGCGG AATACTTTTT AATTTGGATT GTAAAAATAA AAAATATAAC 
AGAGATTTAA GGCAGTACTG CTACAGAAAT CTGCTTTTAG CCGAAAAGCA GACTCGAATC 
CCCGGTGTTT TTGCAGATTC TTTAACCAGT TTGGATTTTG ATTTGGATGG CATTAAGGAG 
TTTATATCCC AGCGGGAACA TCTTAATATG TATATTCACG CTCTGGGTGG AAAGATTTTT 
GAGATGGATG TATTTTCCGC CTATAAAAAC TATGCAGATA TCTGCTCCGA AGAGACCGGA 
TTATTTGTAG ACCATCTTAT ATCTTCGGAT GAGCTTGAAA CAATTAGAAA TGGGGACTTT 
AAGTCTGCTG TTGCCAAGCC GGTTTTTTGC GAAAATCTTT ATCAGGATGT AAAATTCGAC 
AGGGTTAAAT TTGAGCTTCT AATGAAAACC GAAGGAAGCT TCCGCAGTTT TAATCAATTG 
GTATCCTTAC GCAAACAATA CAGCTTCAAT GATCATGGCG TCCAAGTTCA ATATATTTTA 
AAAAATGAAA GTCCCTTTAA TCTTTCGGCT TATTTTATGG TGGAAATAGA CCTGTCCGTA 
AGCCCTATTG AAAAAAAACT TGCAAGCGTT TCAGTTTATG CAGATGATCA AAAATATGAG 
GCTTCTCAAG AAAAAAATAC CTTTTCAAAG GTTTCTTGGG TTCAGATAAC GGAACCTGAA 
GGGAAGACTG TCTTTACCAT AGAATCTAAT GAGGCTGCAG AGTGTATTAT TCTTCCCATA 
TACGAGAAAA TCTCTGAGGC AAAAAATCCT ATTATGGGAA TAAGAAATCT GTTTTTTTGG 
AAGGTCGATT TAAATTCCGG ATTTGAAACG GAAAAGCTTC TTTTCTTTAA GGTAGATGCA 
AAAAAAGCGG GAAAAGAAAA ATAA 

 

Protein sequence

MEKNSKKKLE ICFAVHADYN VIDEFSKEDY TQDYKDFFSS LYASPSIPFT LVFSGRFLEW 
IQRKNPSFFD VIYEMHNRKQ VEILGNAFYE PFISMIPSSD LIGQIEYMTD TLRKHSYKRP 
RGMYLPYFAW NPNILPNLQK CGMEYCLLDF RFFIKAGLNA FAPVCMEDGG KILFGIPSTY 
EFENTDLQPA AFYDLLCNYA SVVTETSVVV FLSGETAVRF LDKSKGKKSW MEEFLERISS 
PDSVISLTHT GQIIKNKRIY QKGFISSNAI FSNQLVNSSV KQLLANKPNV YAMYAKMIYV 
HSLVNQVRGD KARKNNSSLD LWKAESGILF NLDCKNKKYN RDLRQYCYRN LLLAEKQTRI 
PGVFADSLTS LDFDLDGIKE FISQREHLNM YIHALGGKIF EMDVFSAYKN YADICSEETG 
LFVDHLISSD ELETIRNGDF KSAVAKPVFC ENLYQDVKFD RVKFELLMKT EGSFRSFNQL 
VSLRKQYSFN DHGVQVQYIL KNESPFNLSA YFMVEIDLSV SPIEKKLASV SVYADDQKYE 
ASQEKNTFSK VSWVQITEPE GKTVFTIESN EAAECIILPI YEKISEAKNP IMGIRNLFFW 
KVDLNSGFET EKLLFFKVDA KKAGKEK