Gene TDE1384 details

Gene Information

• Locus tag: TDE1384
• Symbol: cadA
• ID: 2741145
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1422905
• End bp: 1424836
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637160263
• Product: cadmium-translocating P-type ATPase
• Protein accession: NP_971990
• Protein GI: 42526892
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG2217] Cation transport ATPase
• TIGRFAM ID: [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC; [TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; [TIGR01525] heavy metal translocating P-type ATPase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTAGTAC AATTCGGTAT TTCGGCCTTG TTTTTTGCCG GAGGTATTTT TACCCGTATT 
TTTTTTGCGG AAGCCGGAAT ACAAATTAAG AATTTTTATG CAGCTTTTTC GACGGTTTTA 
TTTGTTATAG CGTGGCTGAT AGCAGGCTAC AAGGTTTTGT TGACTTCGGT AAAAAATATT 
TTAAAAGGTC AAGTTTTTGA TGAAAATTTT TTGATGTCTG TTGCAACAAT CGGTGCCTTT 
ATTTTAGGTG ACTGGACCGA GGGTGCAGCG GTTATGCTCT TTTACAATTT AGGCGAGGTG 
GTACAGCACT CGGCCGTCGA AAAATCGAGG CGTTCAATCA TAGATCTTAT GGACCTCCGA 
CCCGATTTTG CCCGCCTTTA TGATTCCGAT TCTAAAGAAA AACTTGTAGA TCCTGCAAGC 
GTAAAAATCG GTTCCTTGGT TCTTGTAAAA GCCGGTGAAA AAATCCCCTT GGACGGTGTC 
ATTTATGAAG GAAGTGCCGA ACTTGATACC TCATCTATGA CGGGAGAAAG CCTTCCGCGT 
ACTGCAGAAA AAGGCAGCCC CGTACTTGCA GGTTTTGTAA ACTTAACGGG AGTTATAACG 
GTAAAGACAA CAGCTTCTTT AGAAAATACC GCTGCCTCAA AGATGCTTGA GCTAATTGAG 
TCCGCACAAA ACAGAAAGGC TAGGGTAGAA CGCTTTATTA CATCCTTTGC GAAGATTTAC 
ACTCCGATAG TTACGATAGG AGCGGTTCTT CTTTCGGTTT TACCGCCTCT TTTAAGTGCG 
CTTATTTTTT CAACGCCTAT TAACGGCTGG GAAAGTTTTG CTCCGTGGAT TTCACGCGGC 
CTTGTATTTT TGGTAATTTC CTGTCCTTGT GCCTTTGTTA TTTCGGTTCC GCTGGGGTAT 
TTCGGCGGAA TAGGAGGAGC TGCAAAACGG GGTATACTGA TTAAAGGTGC CGATTACATA 
GATGCCCTTT CAAAGGCCGA TGCCGTTGTC TTCGACAAAA CGGGAACTCT TACCAAGGGT 
GTTCTAAAGG TTATGACCTT AATGCCTGCG GAAAATGTAG AAAAATATGA ATTTTTAAAA 
TTGACCGCTC TTGCCGAATT CAATTCTCAT CATCCTATAG CTAAAGCCGT TCAAGATTGT 
GCCCTAATTA ACTTGTCCGA AGAGGTAACA AAGACTTTTC CAAATGCCGA GCTTACAGAC 
TATTACGAAA AGGCTGGAAA AGGTATCTCG GTAAATTACA AGGGAAAGAG CCTTTTAGCC 
GGAAAAAATT CCTTTATAAG CGAAAACATA GGAAAGGAAA TTCCTTTATA TGGAGATGAG 
ATAGGCGGAA CTCAAGTTTA TGCCGCTTAT GACGGTGAGT ACATAGGCTG CTTGATTTTA 
ACCGATACGC TTAAAAATGA AGCTAGGGAA GCTATATCCG ATTTAAATAA ATTGGGGCTT 
TCAAGGGTAG AAATACTTAC CGGCGATAAT GAAAAATCGG CCAAAAAGAT TGCAGAAGAT 
TTGGGCATAA AAAATTACAC CTCAATGCTT TTACCCCATG AAAAGGTTTC AAGGTTTGAG 
GAAATTTCCG ATGAAGTAAA AGCAAAGAAT AAGAAGGCTT CTGTTATCTT TGTAGGAGAC 
GGTATAAACG ATGCTCCCGT ATTGGCACGC TCGGATGCAG GTATAGCTAT GGGCGGTATA 
GGAAGTGATG CTGCCATTGA GGCGGCTGAT GTTGTTCTTA TGAACGATAA TCCCCGTCTT 
GTTGCTGCGG CCGTAAAACA TGCAAGGTTT ACCCGAAAAA TAGTTTGGCA AAATATAGCC 
TTGGCCTTCG GTATAAAAAT CGGCTTTTTA ACCTTGGGCG CTCTCGGTCT TGCAAACCTT 
TGGGCTGCTG TTTTTGCCGA TGTCGGAGTT GCCTTATTGG CCGTATTTAA TTCTTTAAGA 
GCAAAAAGAT AG 

 

Protein sequence

MVVQFGISAL FFAGGIFTRI FFAEAGIQIK NFYAAFSTVL FVIAWLIAGY KVLLTSVKNI 
LKGQVFDENF LMSVATIGAF ILGDWTEGAA VMLFYNLGEV VQHSAVEKSR RSIIDLMDLR 
PDFARLYDSD SKEKLVDPAS VKIGSLVLVK AGEKIPLDGV IYEGSAELDT SSMTGESLPR 
TAEKGSPVLA GFVNLTGVIT VKTTASLENT AASKMLELIE SAQNRKARVE RFITSFAKIY 
TPIVTIGAVL LSVLPPLLSA LIFSTPINGW ESFAPWISRG LVFLVISCPC AFVISVPLGY 
FGGIGGAAKR GILIKGADYI DALSKADAVV FDKTGTLTKG VLKVMTLMPA ENVEKYEFLK 
LTALAEFNSH HPIAKAVQDC ALINLSEEVT KTFPNAELTD YYEKAGKGIS VNYKGKSLLA 
GKNSFISENI GKEIPLYGDE IGGTQVYAAY DGEYIGCLIL TDTLKNEARE AISDLNKLGL 
SRVEILTGDN EKSAKKIAED LGIKNYTSML LPHEKVSRFE EISDEVKAKN KKASVIFVGD 
GINDAPVLAR SDAGIAMGGI GSDAAIEAAD VVLMNDNPRL VAAAVKHARF TRKIVWQNIA 
LAFGIKIGFL TLGALGLANL WAAVFADVGV ALLAVFNSLR AKR