Gene TDE1373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1373 
Symbol 
ID2741134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp1417269 
End bp1417931 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content35% 
IMG OID637160252 
ProductHD domain-containing protein 
Protein accessionNP_971979 
Protein GI42526881 
COG category[R] General function prediction only 
COG ID[COG1418] Predicted HD superfamily hydrolase 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTGCG AAATAAATAA TATATTGATT GAAAAAACAA AGGCTTTTCT AAAAAGAAAA 
TTCGATGAGA GTAAATATTT AAGCGGACAT CCCGAAGAAA AAGCATACCG GCTTGAACAT 
TCTTACCGCG TTGCAAATAT CGGCAAAGCG ATAGCCGAAA AAGAAAATTT TTCCATTACG 
GAAATGATAA TTGCCTGTCT TCTCCATGAT ATTTCTTACT GCGAAGAATT CTGCGGCAAG 
GAGGATTGGC TTAACCATGG ACGAAATGCG GCAAAAATCT CCTATCCTTT TCTTAAAGAA 
TTGGGATTAC CTGAAGATAG GATTAACGAT ATATGTTACG GAATAGCGAT TCATGTAGAC 
GACAAAGCCG ATTTTGAGGG AGAGCGCACC TCATTTGCTC TGACGGTAGG AGATGCGGAT 
AATATTGACA GATTTGATGT GTATAGGATT TATGAAACTC TGCATAACAA TAATTTTAAA 
GATATGAATA TTTCGCTTAA AAAAGATTAT GTTGAAAAGA GACTCAATGA GCTTTACAAA 
TTGCTAAACA TGGAACTGGG AACAAAATCT GCGGAAGATC TATGGAAAGA GAGACTGGTA 
TTTTACATTG AGTTTTACGA AAAACTAAAA GAGCAATTAA AAATAAGCGA GGATGTGTTT 
TAA
 
Protein sequence
MKCEINNILI EKTKAFLKRK FDESKYLSGH PEEKAYRLEH SYRVANIGKA IAEKENFSIT 
EMIIACLLHD ISYCEEFCGK EDWLNHGRNA AKISYPFLKE LGLPEDRIND ICYGIAIHVD 
DKADFEGERT SFALTVGDAD NIDRFDVYRI YETLHNNNFK DMNISLKKDY VEKRLNELYK 
LLNMELGTKS AEDLWKERLV FYIEFYEKLK EQLKISEDVF