Gene TDE1369 details

Gene Information

• Locus tag: TDE1369
• Symbol: uvrB
• ID: 2741130
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 1409894
• End bp: 1411882
• Gene Length: 1989 bp
• Protein Length: 662 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637160248
• Product: excinuclease ABC subunit B
• Protein accession: NP_971975
• Protein GI: 42526877
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0556] Helicase subunit of the DNA excision repair complex
• TIGRFAM ID: [TIGR00631] excinuclease ABC, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCAGT TTAAACTTAT TTCGGATTAT AAACCTTCAG GTGATCAGGG AGAAGCTATC 
AAGGCTCTTT CAGACGGAAT AATTGCAGGC GACAAATTTC AAACGCTCAA AGGTGTTACG 
GGATCGGGAA AAACTTTTAC AATGGCAAAT ATTATTCAAG CCGTACAAAA GCCGACCCTA 
ATCATAAGCC ACAACAAAAC CCTTGCCGCT CAGCTTTACA GGGAATTTAA AACCTTTTTC 
CCTGAAAATG CCGTCGAATA CTTTGTTTCA TATTACGACT ACTATCAGCC TGAAGCCTAT 
GTTCCCGCAC GCGACCTTTA TATCGAAAAG GACGCTTCAA TAAATGACGA GATCGACCGC 
CTCCGCCTAT CGGCAACCTT CAGCCTTATG GAACGCCGAG ACGTAATCGT CGTTTCCACC 
GTTTCCTGTA TTTACGGTTT GGGGCTTCCC GAATCGTGGC GGGACTTACG CATAACCATA 
GAAAAAGGCG AAAACATCGA AATCGAAAAA TTAAAAAAAC AGTTGATAAG TTTGCAATAT 
GAAAGAAACG ATGCAGTCCT TGAAAGAGGC CGCTTCCGCG TCAAAGGTGA TGTTATGGAA 
ATTTTTCCGG CCTACATGGA AGATGCCTAC CGCCTTGAAT TCGATTGGGA AGAAATTGTG 
CGCATCAGAA AATTCAATCC GATTTCGGGT GAGGTAATAC AGGAATACGA AGAGCTTTCA 
ATTTATCCTG CAAAACACTT TGTGATGCCG GAAGATGCAA TTCCCAATGC TCTTGAAAGA 
ATAAAAAAAG AATTGGAAGA AAGGCTGAAT GTTTTAAATA AGGAAGGAAA GCTCCTTGAA 
GCAGAAAGGC TAAAAACCCG CACCGAATAC GATATCGAAA TGCTTTCCGA AATGGGTTAT 
TGCCCCGGCA TCGAAAATTA CTCGGCTCCA ATCGCAAACC GGAAACCCGG AGAGCCTCCC 
GCTACCCTCT TTCATTATTT TCCCGATGAC TTTTTATTGT TCATGGATGA AAGCCATGTA 
ACATTTCCTC AAGTGGGAGC CATGTATGAA GGAGACCGCA GCCGCAAACA AAATCTTGTA 
GACTTCGGTT TCCGTCTTCC TTGTGCCTTA GATAACCGCC CTTTAAAAAT CGACGAGTTT 
GAAAAGATGC TTAATCAGGC CGTTTTTGTT TCCGCAACCC CCGGCCCTAA AGAAATAAAA 
TACTCTACCC GCATTGTCGA ACAAGTAATA CGCCCTACAG GCCTTTTGGA TCCGATAATC 
GAGATTCATA AAAGCGAAGG CCAGATGGAG CATATCTACG GAGAGGTAAA AAAACGCATT 
GCCCTAAACG AACGCAGCCT AATTTTAACT CTTACAAAAA AGATGGCGGA AGACTTAACC 
GATTATCTTA CAGGGCTCGG TCTCAAAGTA AAATATATCC ACAGCGAAGT TGAAACGATT 
GAGCGTGTCG AAATTCTAAA GGGCTTGCGT GCAGGAGAAT TTGATGTGCT TATAGGAATC 
AACCTTTTAA GAGAAGGCAT CGACTTACCC GAGGTTTCTT TTATCGGAAT TCTCGATGCA 
GATAAGATAG GCTTTTTGCG TTCTACTACA AGTCTTATTC AGATTGTAGG ACGGGCAGCC 
AGAAACGAAA ACGGTAAGGT AGTTATGTAT GCCGACAGGA TAAGCGATGC TATGAAAGAA 
ACCATAGAAG AAACAAACCG CCGCCGTGCT ATTCAGGAAG CCTACAACAA GGAACACGGT 
ATAACACCCA AGACAATCAA AAAAGCAATT GAAGATATTT TAACACGGGA AAATGAAATA 
AAAAAAGAAG CGGCCCTTGC AGAAGCCGGC CCCCTTATCA ACAGCCTAAA CATTTTAAAC 
CCTGCCGACA GAAAAAAACT TATCAAAAAA CTTGAGGCCC AGATGGCCGA ATATGCCGAC 
ATGCTCATGT TTGAAGAAGC AGCAGTCATA AGAGACAAGA TAGAAGAAGT AAAGCGGATA 
GGAAGTTAA 

 

Protein sequence

MKQFKLISDY KPSGDQGEAI KALSDGIIAG DKFQTLKGVT GSGKTFTMAN IIQAVQKPTL 
IISHNKTLAA QLYREFKTFF PENAVEYFVS YYDYYQPEAY VPARDLYIEK DASINDEIDR 
LRLSATFSLM ERRDVIVVST VSCIYGLGLP ESWRDLRITI EKGENIEIEK LKKQLISLQY 
ERNDAVLERG RFRVKGDVME IFPAYMEDAY RLEFDWEEIV RIRKFNPISG EVIQEYEELS 
IYPAKHFVMP EDAIPNALER IKKELEERLN VLNKEGKLLE AERLKTRTEY DIEMLSEMGY 
CPGIENYSAP IANRKPGEPP ATLFHYFPDD FLLFMDESHV TFPQVGAMYE GDRSRKQNLV 
DFGFRLPCAL DNRPLKIDEF EKMLNQAVFV SATPGPKEIK YSTRIVEQVI RPTGLLDPII 
EIHKSEGQME HIYGEVKKRI ALNERSLILT LTKKMAEDLT DYLTGLGLKV KYIHSEVETI 
ERVEILKGLR AGEFDVLIGI NLLREGIDLP EVSFIGILDA DKIGFLRSTT SLIQIVGRAA 
RNENGKVVMY ADRISDAMKE TIEETNRRRA IQEAYNKEHG ITPKTIKKAI EDILTRENEI 
KKEAALAEAG PLINSLNILN PADRKKLIKK LEAQMAEYAD MLMFEEAAVI RDKIEEVKRI 
GS