Gene TDE1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1365 
Symbol 
ID2739466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp1407895 
End bp1408473 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content30% 
IMG OID637160244 
ProductTetR family transcriptional regulator 
Protein accessionNP_971971 
Protein GI42526873 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAA AAGAAGAACT TTTGGCTAGT GCACATGCCA TTTTTACAAA AAAGGGATAT 
AAGGAAACAA ATATTTCGGA TATTACAAAA TCAATAAATG TTGCAACAGG TTCTTTCTAC 
AAATATTATT CTTCCAAAGA AGATATATTT TTAGAGGTTT ACAAACTTGA AAATACGAGA 
GTGAGGCAAT TAGTTATGGA ACATGTTGAT TGGCAGCTGC CGATCGAATC GATTATTGAA 
TCATTGTTTT TCGTAACTTC AAAACATTTA TTTGGGAATA AGATAATGGC GGAATGGAGT 
AATCCCAAAA TATCAAAGAT TCTACGTAAA TACTATTTTT CAGAACAAGG AAAAAAGGAT 
AATCAATTTC ACAATTTTTT GATGACTGTG ATTGATAAAA AAATGAAAGA ATTAAAAATT 
AAGCCTCAAT TAGCCGTTCG GTTAAAGAGG GTATATGAGT TTTTATATTA TATTGATTGC 
CATGTAACAG ATTCTGATTT TGAAGGCTGC AGTGAAGTAA TTAAACTTCT TACAGTATAT 
TTTGTAAAAG GTTTGGTATA TGAAAATTCC GCTAGATAA
 
Protein sequence
MDKKEELLAS AHAIFTKKGY KETNISDITK SINVATGSFY KYYSSKEDIF LEVYKLENTR 
VRQLVMEHVD WQLPIESIIE SLFFVTSKHL FGNKIMAEWS NPKISKILRK YYFSEQGKKD 
NQFHNFLMTV IDKKMKELKI KPQLAVRLKR VYEFLYYIDC HVTDSDFEGC SEVIKLLTVY 
FVKGLVYENS AR