| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1340 |
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| Symbol | |
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| ID | 2741074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1376457 |
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| End bp | 1377092 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637160218 |
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| Product | 50S ribosomal protein L25/general stress protein Ctc |
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| Protein accession | NP_971946 |
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| Protein GI | 42526848 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000396985 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACAGA GACTGTTAAA CGCAAATGAA AGATCAACAT ATGGTAAAAA TGCCGCTGTA
AAAATGAGAA AAGCTGGAAG AATTCCCGCA GTAATGTATG ATAGACACGG CAAATCCGTT
CCTATTGATG TTGATGAAAG AGAATTTATG AAACTTTTTA AACTTGTTAC CGAAAGTACT
ATTGTAACAT TAAATGCCGC GGGAAAGGAT TACGAAGTTT TTATTAAAGA TTTTCAGCAT
GATATTGTTT CGGATAAGAT TAAACATATC GACTTTTATG AAGTAGAAAG AGGAAAGACC
TTACGTACAA AGGTTAAGAT TAGACTTGAA GGTTCTCCCG AAGGTGTACG CCATGGTGGA
ATTCTTGAGA CCGGTATTAC CGAACTTGAA CTTGAGTGTC TGCCTAAGGA TCTTCCTGCC
AGAATTATCG TTGATGTTTC TGCTCTTGAT GTAAATCAAT CGCTTCATGT CAGGGATATT
AAGCTTCCTG AAGCCGTTAC CGTTTTAACA AGCGATGATA TAACGGTTGC TGCTATTAAG
TTTGCTGCTG CTGAAAGTAC AACACCGGCT GCAACTGAAG GTGAAGAAAC CGAAGCTGCC
GCTGCCGCAC CCGAACCTGC TGCAGAGGAT AAATAA
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| Protein sequence | MEQRLLNANE RSTYGKNAAV KMRKAGRIPA VMYDRHGKSV PIDVDEREFM KLFKLVTEST
IVTLNAAGKD YEVFIKDFQH DIVSDKIKHI DFYEVERGKT LRTKVKIRLE GSPEGVRHGG
ILETGITELE LECLPKDLPA RIIVDVSALD VNQSLHVRDI KLPEAVTVLT SDDITVAAIK
FAAAESTTPA ATEGEETEAA AAAPEPAAED K
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