| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1338 |
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| Symbol | ispE |
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| ID | 2741072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1375029 |
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| End bp | 1375883 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637160215 |
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| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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| Protein accession | NP_971944 |
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| Protein GI | 42526846 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000239263 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTAAAA GTGCGATTAG CCTTAAAGCT CATGCAAAAA TTAATCTGCA TTTGGAAGTT
TTAGGAAAGA GAAGCGACGG ATTTCATGAC ATCGTAAGTG TTTTTGCTCC GATTTCTCTT
GCCGATGAGC TTTTGATGCA AAGAAAACCG GATAAAAAAG AATGTAAGGT ATTGTCTCCT
TTGGCTGAAT TGCCGGCAGA AAATACAATT ACAAGAGCTT ATGAAGAGTT TAAAAACTTT
GCCGGTATTT CTGAAGGCAT TTCCGTTAGG ATTTTAAAAA GAATCCCTGA AGGTGCCGGA
TTGGGAGGCG GGTCTTCCGA TGCCGCTTCG GTTTTGCGGG GGCTTAACGA TATGTTTTCT
ACCGGTTTAG CGGAAGAAGA CTTAAGGGCT ATAGCTTTGA AAATAGGAAG CGATGTTCCC
TTTTTTTTGG GAAATGAGGC TGCGGTTGTA AGAGGCCGCG GAGAAACGAT AAAAAGGGTT
TCAGTTTTTT CAGATTATTT TGGGATTTTG ATTTATCCCG AAATAAAAAG CGCTACACCC
AGGGCTTACA GCCTTTTAGG CCGTAAAGAA TCGGAGATAC TGAATCCTGC TTTTAATCCT
GAGCTTTTTT GCGGTAAAGA TTGCCGTGAA TGGCCTTTTT TTAACAGTTT TGAAGACGTT
CTTTTTACGG AATATCCTGC AATAAAAAAG GCAAAACAAG ACCTTTTAAC TAACGGGGCT
GATTTTGCTC TTATGAGCGG TGCCGGTTCT TCAGTTTTCG GGCTTTTTAA AAATGAAAAA
ACCGTCAAAA ATGCTTATTC TAAGCTTTTA GCCGAATATG GACGATGTTT TTTCTTTTTG
TTACTTGCGT TCTGA
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| Protein sequence | MIKSAISLKA HAKINLHLEV LGKRSDGFHD IVSVFAPISL ADELLMQRKP DKKECKVLSP
LAELPAENTI TRAYEEFKNF AGISEGISVR ILKRIPEGAG LGGGSSDAAS VLRGLNDMFS
TGLAEEDLRA IALKIGSDVP FFLGNEAAVV RGRGETIKRV SVFSDYFGIL IYPEIKSATP
RAYSLLGRKE SEILNPAFNP ELFCGKDCRE WPFFNSFEDV LFTEYPAIKK AKQDLLTNGA
DFALMSGAGS SVFGLFKNEK TVKNAYSKLL AEYGRCFFFL LLAF
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