Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1333 |
Symbol | |
ID | 2741067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1369144 |
End bp | 1370208 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637160210 |
Product | hflC protein, putative |
Protein accession | NP_971939 |
Protein GI | 42526841 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.792666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAACT ATGAAAATAC CGAAAACGGA AACACTGAAG ATGTAAGATT TGAAAGTCCT TCTTCCAAAA ATAAGATAAA ACCCGAAAAA AACAAAAAAG ACAAAAAAGG TTTCGGATTG TTTTTCTTTG TGGTTATACT TCTTGTTTTG TTTTTTTTCC TAAAACCTTT TTATATTTTA AATGAGGGCA ATGTTGCCAT TATAACGAAA TTCGGAGCTG TAGTAAAAAC GGAAAAAGAG GCCGGGCTTC ATTTTAAAAT GCCCTTGATT CATACCGTAA ACAAATACAC GGCAAAACTC TTACGTCTTG ACGGCGATCC ACAAAAGATT CTTACTTTAG AAAAACAGTA TCTTAAGGTA GATACTACCA GCCGATGGCG TATAGTTGAC GTAAAAAAGT TTTATGAATC CCTTACAACC TATGATAGCG CTTATTCCCG CCTTTCGGAT ATTGTAGATT CATCTGTTAG AGATATTATT TCTGTAAACA GTCTTGCCGA TGTTGTACGA AGTTCAAATA TTATAAATGA AAGCAAAAAA ACGGAAGAGT TTAACCTTGA AAATGCCGAA GTTGACCTTG GTTCCTTAAA GACGGAAAAA GTAAACTTCC CTGTGATAAA AAAGGGCAGG GAAACTCTGG CTGATGAAAT TTTGGCCAAG GCCAATAGCC AGCTGGGTGA ATTCGGCTTG GAGGTGGTTG ACCTGATTTT TAAAGGAATT AAGTATTCGG ATGAGCTTGA AAATTCCGTA TTCAGCCGCA TGATAAAAGA AAGGAATCAG ATCGCCGGAA CCTTTAGGTC TACAGGCGAC GGTGAAAAAC TTAAAATCTT AGGAGAGTTG GAAAACGAAA AGCGGACTAT CCTGTCGCAA GCCTATGCCG AGTCAGAAAG GATAAAGGGA GATGCCGATG CAAAGGCTGT TGCAATCTAT GCCGAAAGCT ACGGTAAGTC TCCCGAATTC TACAGCTTTT GGAAAAGCAT GGAGATTTAT AAAAATTCCT TGCCCGAGAC CGAAAAAGTC CTCTCAACGG ATATGGAATA TTTTCAGTAT CTGTATAGGC ATTAA
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Protein sequence | MENYENTENG NTEDVRFESP SSKNKIKPEK NKKDKKGFGL FFFVVILLVL FFFLKPFYIL NEGNVAIITK FGAVVKTEKE AGLHFKMPLI HTVNKYTAKL LRLDGDPQKI LTLEKQYLKV DTTSRWRIVD VKKFYESLTT YDSAYSRLSD IVDSSVRDII SVNSLADVVR SSNIINESKK TEEFNLENAE VDLGSLKTEK VNFPVIKKGR ETLADEILAK ANSQLGEFGL EVVDLIFKGI KYSDELENSV FSRMIKERNQ IAGTFRSTGD GEKLKILGEL ENEKRTILSQ AYAESERIKG DADAKAVAIY AESYGKSPEF YSFWKSMEIY KNSLPETEKV LSTDMEYFQY LYRH
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