Gene TDE1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1333 
Symbol 
ID2741067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1369144 
End bp1370208 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content38% 
IMG OID637160210 
ProducthflC protein, putative 
Protein accessionNP_971939 
Protein GI42526841 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01932] HflC protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.792666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACT ATGAAAATAC CGAAAACGGA AACACTGAAG ATGTAAGATT TGAAAGTCCT 
TCTTCCAAAA ATAAGATAAA ACCCGAAAAA AACAAAAAAG ACAAAAAAGG TTTCGGATTG
TTTTTCTTTG TGGTTATACT TCTTGTTTTG TTTTTTTTCC TAAAACCTTT TTATATTTTA
AATGAGGGCA ATGTTGCCAT TATAACGAAA TTCGGAGCTG TAGTAAAAAC GGAAAAAGAG
GCCGGGCTTC ATTTTAAAAT GCCCTTGATT CATACCGTAA ACAAATACAC GGCAAAACTC
TTACGTCTTG ACGGCGATCC ACAAAAGATT CTTACTTTAG AAAAACAGTA TCTTAAGGTA
GATACTACCA GCCGATGGCG TATAGTTGAC GTAAAAAAGT TTTATGAATC CCTTACAACC
TATGATAGCG CTTATTCCCG CCTTTCGGAT ATTGTAGATT CATCTGTTAG AGATATTATT
TCTGTAAACA GTCTTGCCGA TGTTGTACGA AGTTCAAATA TTATAAATGA AAGCAAAAAA
ACGGAAGAGT TTAACCTTGA AAATGCCGAA GTTGACCTTG GTTCCTTAAA GACGGAAAAA
GTAAACTTCC CTGTGATAAA AAAGGGCAGG GAAACTCTGG CTGATGAAAT TTTGGCCAAG
GCCAATAGCC AGCTGGGTGA ATTCGGCTTG GAGGTGGTTG ACCTGATTTT TAAAGGAATT
AAGTATTCGG ATGAGCTTGA AAATTCCGTA TTCAGCCGCA TGATAAAAGA AAGGAATCAG
ATCGCCGGAA CCTTTAGGTC TACAGGCGAC GGTGAAAAAC TTAAAATCTT AGGAGAGTTG
GAAAACGAAA AGCGGACTAT CCTGTCGCAA GCCTATGCCG AGTCAGAAAG GATAAAGGGA
GATGCCGATG CAAAGGCTGT TGCAATCTAT GCCGAAAGCT ACGGTAAGTC TCCCGAATTC
TACAGCTTTT GGAAAAGCAT GGAGATTTAT AAAAATTCCT TGCCCGAGAC CGAAAAAGTC
CTCTCAACGG ATATGGAATA TTTTCAGTAT CTGTATAGGC ATTAA
 
Protein sequence
MENYENTENG NTEDVRFESP SSKNKIKPEK NKKDKKGFGL FFFVVILLVL FFFLKPFYIL 
NEGNVAIITK FGAVVKTEKE AGLHFKMPLI HTVNKYTAKL LRLDGDPQKI LTLEKQYLKV
DTTSRWRIVD VKKFYESLTT YDSAYSRLSD IVDSSVRDII SVNSLADVVR SSNIINESKK
TEEFNLENAE VDLGSLKTEK VNFPVIKKGR ETLADEILAK ANSQLGEFGL EVVDLIFKGI
KYSDELENSV FSRMIKERNQ IAGTFRSTGD GEKLKILGEL ENEKRTILSQ AYAESERIKG
DADAKAVAIY AESYGKSPEF YSFWKSMEIY KNSLPETEKV LSTDMEYFQY LYRH