Gene TDE1330 details

Gene Information

• Locus tag: TDE1330
• Symbol: nrdR
• ID: 2741064
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1365519
• End bp: 1365974
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637160207
• Product: transcriptional regulator NrdR
• Protein accession: NP_971936
• Protein GI: 42526838
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.768673
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGATGTC CGCATTGCGG AAACTGCGAT GATAAGGTTA TGGAATCAAG AACTCTGGCT 
CAAGGGGATT GTATCCGAAG GAGACGGGAG TGTCTTGCCT GCGGTTACCG CTTTACAAGT 
TATGAGCATA TTGAAGAAAA ACCTTTTATG GTTATCAAAA AAGACGGCCG CAGGGAGCCC 
TTTGACCGAA AAAAGCTTGA AAAAGGTATT GAACGAGCTC TTGAAAAGCG GCCTGTTTCC 
TTAAACAGTA TAGAAAATAT TGTTACTGAA ATTGAAGATC AAGCTGTTTT AAATTCCGGT 
CTTAACAAAG AAATAGAAAC TACTGTTTTA GGCGAAATGG TTCTATCTCA TTTGTATTCA 
ATAGACAAGG TGGCATATAT CCGCTTTGCC TCCGTTTATA AACAATTCAG CAACTTGGAT 
GAATTTGTAA ACGAGGTAAA AAAAGTAAGA AAATAA 

 

Protein sequence

MRCPHCGNCD DKVMESRTLA QGDCIRRRRE CLACGYRFTS YEHIEEKPFM VIKKDGRREP 
FDRKKLEKGI ERALEKRPVS LNSIENIVTE IEDQAVLNSG LNKEIETTVL GEMVLSHLYS 
IDKVAYIRFA SVYKQFSNLD EFVNEVKKVR K