Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1314 |
Symbol | |
ID | 2739572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1351314 |
End bp | 1353176 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637160191 |
Product | penicillin-binding protein |
Protein accession | NP_971920 |
Protein GI | 42526822 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAAG TAGATAGTTT TATTTCAAAA CCTAGGTTTT GGTTTTTTAT AAGTCTTGTA ATTATTTTTG TTGTTTTGCT TATACTCCAA TTTGCAAAGT ACATGATAAT GAAAGAACCT ATAGTGATTA CGCCTAAGGT TTCGACTGAA AGGGGGACTA TATATGACAG AAATAAAAAA ATCCTTGCAG TTCAGACAAC TATCTATAAT CTTTATGCCG ATAAAACCCT TATGAAAAAT CCTGCCGAGG CGGCGAAGGT CTTGGCCCCT GTTTTAATGC AAAATGAATC CGATCTCTTG GAAAAAATTC AAGATTCCAA ATCCAATTTT TTATATTTAA AAAAAAGAAT GAGCGAAAGT GAAAGGGATT TGGTTAAAAA CGTTATAGAT GAAAATAAAT TAAGCGGTAT TAGGTTTGAG TCTGTGTTTA ACCGCACCTA TCCCGAAAAT ACCTTAGCCT CTACAGTCGT AGGTTTTTTA GGTGATGACG GCAGGGGTAA AACAGGCGTA GAATATTCTC TTCAAAATAT TCTCTCTCCC CCTCCTGAAA CAAAGGGCTA TACTGGCAAA GGCTACGACG TTTATCTCAG TATAGACGGA AACATTCAAT ACATGCTCGA AAAAATTATA TCGAAAACGA TGGAAGAAAC AAAGGCTCAA TCTGCCGTTT TTCTTGCAGT TGATGCAAAG ACCGGAGAGG TCCTCGCCTA TGTGAACTCT CCTTCTGCCT CCCTTGCAAA CTTTATCGAA AGCACTCCTG AACAGCGCCT TGATCGTCCT GCAAACTATG TTTATGAGCC GGGGTCGGTT TTTAAGATAT TTTCTATGGC CGCCTTTTTG GAATTGGGCA CTACTAAGGA CGGGCAGGTA TACGACTGCA ATGCTCTTTT TGAATTTAAC AGACCCAATG TAAAACCCAT TACCTGTTTA AAGACTCATG GCAGGGTAAG CCCGCGGGAT ATAATCCGCC TTTCGTGTAA CGATGCAACT GCCCAGATTG CCGATATTAC CGAAAAAAAT GCTTTTTATG AAAAGATTAA ACTCTTCGGT TTCGGCTCCA AAACCAATAT AGAGCTTCCG GGAGAGTCGG CCGGTCTTCT TGCTCCTCCT CAAAACTGGT CTATACGTAC AAAGCACACA ATCGCTATAG GACAGGAAAT AGGAGTTTCA GCATTGCAGC TGGTTGAAGC TGCAACGGCA TTCACCAATA AGGGTTACAC TTTGAGGCTT TCTCTTATTT CGAAGGTTGC CGACAAGGAA GGAAACATCG TCTACCTTCA TAAGCCCTCG GTTTTAAACA AGGTTATATC CGAAAAAAAT GCCGATCTGC TTTTAAGCTA TATGAGAACG GGCTCCATAG AGGGTATAGC TTGGAGGGCT TCTATCAACG GAGTTCCCAT TGCCGTAAAA ACCGGAACAG CTCAGATGGC AAATGAGAAA GGCGGGGGCT ACAGTAAGAC CGATTTTATT TCAAGCTGTA TAGGAATTTT TCCGGCAGAT GACCCAAAGA TTATTTTGTA TACGGCAGTC ATAAAACCTG TCGGACAAAT ATACGGCTCC GTTATTGCGG CTCCCGTAAT TTCCGAGGCC TCGAACGAAA TTATAGATTA TCTCGGACTT GCAAGAGAAA ACGCTCCTAC CGTTGAACAC ACCGGGCGGA TTCCCATAAG CGAAAATAAA CCTGTCGTTT TAAAAGATAA GATGCCCGAC TTAACGGGCG TTCCTAAAAA ACTTTTGCTT GAGCTTCTTT TACAAAAAGA CTTTTCGGTA AAAATTACAG GTGACGGATA TGTCGTCTCT CAAACTCCTC CGCCCGGAAC ACCTCTTAAA AAAGGAATGA AAATTGAGCT CAATCTCGAA TAA
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Protein sequence | MEEVDSFISK PRFWFFISLV IIFVVLLILQ FAKYMIMKEP IVITPKVSTE RGTIYDRNKK ILAVQTTIYN LYADKTLMKN PAEAAKVLAP VLMQNESDLL EKIQDSKSNF LYLKKRMSES ERDLVKNVID ENKLSGIRFE SVFNRTYPEN TLASTVVGFL GDDGRGKTGV EYSLQNILSP PPETKGYTGK GYDVYLSIDG NIQYMLEKII SKTMEETKAQ SAVFLAVDAK TGEVLAYVNS PSASLANFIE STPEQRLDRP ANYVYEPGSV FKIFSMAAFL ELGTTKDGQV YDCNALFEFN RPNVKPITCL KTHGRVSPRD IIRLSCNDAT AQIADITEKN AFYEKIKLFG FGSKTNIELP GESAGLLAPP QNWSIRTKHT IAIGQEIGVS ALQLVEAATA FTNKGYTLRL SLISKVADKE GNIVYLHKPS VLNKVISEKN ADLLLSYMRT GSIEGIAWRA SINGVPIAVK TGTAQMANEK GGGYSKTDFI SSCIGIFPAD DPKIILYTAV IKPVGQIYGS VIAAPVISEA SNEIIDYLGL ARENAPTVEH TGRIPISENK PVVLKDKMPD LTGVPKKLLL ELLLQKDFSV KITGDGYVVS QTPPPGTPLK KGMKIELNLE
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