| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1300 |
|---|
| Symbol | |
|---|
| ID | 2741054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 1336700 |
|---|
| End bp | 1337509 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637160177 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_971906 |
|---|
| Protein GI | 42526808 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.878996 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACGGGG AAAAAAGCGG AAACAGAGAA CTTTATACAA AACGGGTTTA TGAATATGAT
CAGGTAATAA ACCAAGTTTT AAAACATGAA GAAAATATTC TTTCGCTTAT AAAAAAAGAC
ACATTCGGTG CCGCTTATAA AAGACTGGTA CTTGCCGATG AGATGATTTA CTTGGCAACC
CTTTATCTGG CCAAATTCAG GCTATCGGTA GCCCTCCTCG GCGGAAAAAA CGAAAACATT
CTCAATGAAG CACGAAAAAC CCTGTATAAG CCCATAATCT ACCTTGAAGA AATTGTAACC
GACCTCATAG ATGCTCCTTT TTCCGAATAT GAAGAAGGAG TTGACCGGAT TTCAAAGATT
ACCGAAAAAC AAAGATATTA TCTTATACGA AAACTGGGCC TGGTAATAAA CTTGGTAATA
GATGCATACG GGGAAAATAC CAAATGGCGT TGGTCCTTTA TCGACATAGA AGCCCGTTTT
GCAGTAGTTG CAAAAAACAT AATGGATCTA AAAGAAATAA GCCAAACAGG CTTAAACCCT
CATGCGGAGG ATTATGATAC CGTAATATAT CATCTTAGGC TTGTAAAAAA ACTTTTTACC
AAAGCTGCCG ACAAATATCG CGAAAAATAC GAAATTGTTA CAAACAATAT AAGCGACTTC
CGCACTGCAA TCCTTTTTTT GGAAGGCTTA AGAAGGGTAC ACATGGTTTT AAATGAGCAC
AGGGAAGTTG AAGAAATTAA ACGTAAAATC GAAATCTGGA AAGATAAGAT GGAAAAAGAT
CTAAAGCAAA AGGATAAACC TAAAAAATGA
|
|---|
| Protein sequence | MDGEKSGNRE LYTKRVYEYD QVINQVLKHE ENILSLIKKD TFGAAYKRLV LADEMIYLAT
LYLAKFRLSV ALLGGKNENI LNEARKTLYK PIIYLEEIVT DLIDAPFSEY EEGVDRISKI
TEKQRYYLIR KLGLVINLVI DAYGENTKWR WSFIDIEARF AVVAKNIMDL KEISQTGLNP
HAEDYDTVIY HLRLVKKLFT KAADKYREKY EIVTNNISDF RTAILFLEGL RRVHMVLNEH
REVEEIKRKI EIWKDKMEKD LKQKDKPKK
|
|---|
| |