Gene TDE1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1290 
Symbol 
ID2741044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp1327539 
End bp1328708 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content35% 
IMG OID637160168 
Producthypothetical protein 
Protein accessionNP_971897 
Protein GI42526799 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00000179937 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTTTAT TTATTTCTTG TTTTTCGGAT AATACAAAAC AGGAATTTCC GAAAGAGGCT 
AAGGCTTGTG CTGATTATGT TCTACAAAAC TATATGACAC CCGAATCCTA TGTTATAGAA 
AAATTTAAAG ATCATGATGC CGTTATTTTA GGCGAAAACC ATAGAATAAA ACATGATCCG 
CTTCTTGTAC AAAGGCTAAT TCCCTTGTTG TATGAAAACG GAATTTACAC TGTAGCAATT 
GAATTTGCCT TATATGAAGA TCAGCCTCTT ATCGATGCTC TTGTTACTGC ATCGGAATAT 
GATGAAAAGC TGGCTCAAAA GATAAATTTA AATGCATTCT TGAGTATAGG TCTTGGAGGT 
TATCATGAAT ACTGCGATAT TTTTAAAGCG GCATGGAAAT TAAATGCCTC ACTTCCTCCC 
GATTCAAAAA AAATGCGCAT ACTCGGAATA AACGATGTTC TCGATTGGTC TCTTCAAAAA 
ACGAAAGCAG ATAGAAATAA TCCTGAAATA CGTAAAAAAA TTTTCCGTAA TTTTTCTGAA 
AAAAATTGGG CGTATAGAGT AAAAACCGAA GTGCTCGATA GGGGAGAAAA GGTGCTTTGC 
TATTGCGGTA TGCATCATGC TTTTTCCAAA TACCGCCAAC CTATTGCAGA TGAAAGTCTA 
GGAGCTTTTA TCCGTTTTGG CGATATTCGA TTTGGAAACT ATCTATATGA AAAAATTAAA 
GATAAGGTAT TTACTATTTC GCTGCATTAT CCGTGGGTGT CTGCACAAGG CTATAAAGCT 
CCTAGTGTTT TACCGGTTGA CGGTATAATT GACTATGCTA TGGCACTCCT TCCTAAAGAA 
AACCGTCACT TCGGTGTAGA TACGGCTTCT TCTCCTTTCG GTTTACTGAC ATCGCAAACA 
AGTTATTATA AATATGGTTA TGAGCCTTTT ATGTTAAAGG ATTTTTGTGA CGGTTATATT 
TGTCAAGGCC CTTTTACCGA ATATGAAGGA GTAACACCGA TCAAAGATTT TATTAACGAG 
GATAATATTG AATATGCAAA AGAACATTTA TGGTATCCGA TTAACCAATG GCCCATTCAA 
GAAATTAATG AAGGTAACGC TTCCGATGCA CAAATAAAGC GGCATCATCT TAAAAGTATT 
ATTGAAGCAG TAAAGGACTT GTATAAATAA
 
Protein sequence
MFLFISCFSD NTKQEFPKEA KACADYVLQN YMTPESYVIE KFKDHDAVIL GENHRIKHDP 
LLVQRLIPLL YENGIYTVAI EFALYEDQPL IDALVTASEY DEKLAQKINL NAFLSIGLGG 
YHEYCDIFKA AWKLNASLPP DSKKMRILGI NDVLDWSLQK TKADRNNPEI RKKIFRNFSE 
KNWAYRVKTE VLDRGEKVLC YCGMHHAFSK YRQPIADESL GAFIRFGDIR FGNYLYEKIK 
DKVFTISLHY PWVSAQGYKA PSVLPVDGII DYAMALLPKE NRHFGVDTAS SPFGLLTSQT 
SYYKYGYEPF MLKDFCDGYI CQGPFTEYEG VTPIKDFINE DNIEYAKEHL WYPINQWPIQ 
EINEGNASDA QIKRHHLKSI IEAVKDLYK