Gene TDE1286 details

Gene Information

• Locus tag: TDE1286
• ID: 2741040
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1322197
• End bp: 1322877
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637160164
• Product: TPR domain-containing protein
• Protein accession: NP_971893
• Protein GI: 42526795

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAACCG GAAAACGTTT TAAATTTATT CTATTGACTT TTATTTTTGC TGCAGGCCTT 
TTTTTTACAC AGGCCGGTAT TCTTTTTGCA CAAGATAAAC CTGATGCTCT AAAGCTTTAC 
AGGCAGGGCC GAAGCCTTGA TTCCATAGGA AGGCGTGAAG ATGCAAGAGC CGCTTATCTA 
TCCGCCATAG AAATTTGCCG TAACGAATTA AAGGTAAATT CTAAGAATAT GGATTCTTAT 
GCCGTATATA CATGGTGCCT TTTTCGATTG GGCCGATATA AGGACACCGA ACTGGTATGT 
AGTGATGCCT TAAAAATCGG GAGAGATGCA CGAATTATCG AAACTTTGGC CGAGGCTCAG 
TTTTTCCTTG GAAATTATAA AGACTCTTTG CGGAACATGG AAATGTATAT CGAGATGGCT 
CCCAACGGCG AGCGCATAAG CGTTGCCCAC TTTTTTGTCG GAGAGATTTA CCGAAATACA 
AAAAAATATC ACAAGGCCGA TATCGCTTAT TCCATTTCAG TGCACTTGGA GCCTTCCAAT 
TCTCTTTGGT GGTATAGGCT TGGAATTGTC CGTGAAGCGG CCGGAGAAAA AGAAGGTGCG 
ATTGCAGCCT ATCAAACGGC AGTAAAACTC CGTCCCGAGT TTAAGGAAGC AGCCGAAGCC 
CTCAAACGGG TAAAGATTTA A 

 

Protein sequence

MITGKRFKFI LLTFIFAAGL FFTQAGILFA QDKPDALKLY RQGRSLDSIG RREDARAAYL 
SAIEICRNEL KVNSKNMDSY AVYTWCLFRL GRYKDTELVC SDALKIGRDA RIIETLAEAQ 
FFLGNYKDSL RNMEMYIEMA PNGERISVAH FFVGEIYRNT KKYHKADIAY SISVHLEPSN 
SLWWYRLGIV REAAGEKEGA IAAYQTAVKL RPEFKEAAEA LKRVKI