Gene TDE1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1280 
Symbol 
ID2740573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp1315840 
End bp1316541 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content37% 
IMG OID637160158 
Producthypothetical protein 
Protein accessionNP_971887 
Protein GI42526789 
COG category[L] Replication, recombination and repair 
COG ID[COG4912] Predicted DNA alkylation repair enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA AACAAACACT AATCCAAACT AAACTTTTTC CCTTTGAAGA TAAAAAGTAC 
AAAAACTTCA ATAAAAAGTT GATCCCCAAT ATTGACGAAA ATACTATGAT AGGCATCAGA 
ACTCCCGTCC TGCGTAAATT TGCAAAAGAG TTTTTTAAGA CCGAGCCGGA ACAAGTTTCG 
GACTTTATGA AGGACGTGCC GCACAAGTAT TTTGAAGAAA ACAATCTGCA CTGCTTTTTT 
ATCGAAAACA TAAAAGATTT TAATGAGGCG CTAAAAGAGA CCGAAAAATT TTTGCCCTAC 
ATCGACAATT GGGCAACCTG CGACAGCTTT TCTCCCAAGA TATTTAAAAA GAACCATGAA 
GAAATTTACA AAAAAATTTT GGTATGGCTA AAATCGAAGC ATACCTATAC CGTTAGGTAC 
GCCATCGGGC TTTTATTATC GAATTATCTC GATGAGCATT TTAGACCTGA AATGTTAGAA 
ATTGTTTCAA AAATCAGATC CGATGAGTAC TATATAAATA TGATGATAGC TTGGTATTTT 
AGCTTTGCCC TCATCAAGCA ATACAAAACA GCCCTCCCCT ACATCAAAAA CAAAAAGCTT 
GATACCTTTA CCCACAACAA GGCTATCCAA AAAGCCATCG AAAGCTACCG CATTCCGAAG 
GAAGTAAAAG AGCTTTTGCG AGGGATGAAG GTGAAGGGGT AA
 
Protein sequence
MKTKQTLIQT KLFPFEDKKY KNFNKKLIPN IDENTMIGIR TPVLRKFAKE FFKTEPEQVS 
DFMKDVPHKY FEENNLHCFF IENIKDFNEA LKETEKFLPY IDNWATCDSF SPKIFKKNHE 
EIYKKILVWL KSKHTYTVRY AIGLLLSNYL DEHFRPEMLE IVSKIRSDEY YINMMIAWYF 
SFALIKQYKT ALPYIKNKKL DTFTHNKAIQ KAIESYRIPK EVKELLRGMK VKG