Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1277 |
Symbol | |
ID | 2740570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1310821 |
End bp | 1312302 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637160155 |
Product | Fe-hydrogenase large subunit family protein |
Protein accession | NP_971884 |
Protein GI | 42526786 |
COG category | [R] General function prediction only |
COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000478337 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAACA TAAATAATAA CACATCTAAT ATCAAAAGAG AAATTCTTGT ACGTATTGCA AAGCTCCAGT TTGAAGGGAA GCTTCAAGAA GGAGTTCACT ATATTCCGAG AGAAATGGTT CCGCGAAACA GTACGCCTAT AAGGTGCTGT ATTTTTCATG ACAGAGAAAT AATGAGGCAT CGGGTAATTG CAAGGCTCGG CTGTTCTTTG GAAAATTATG ATGAAGAAAA GACCTTGGCT CAATTTGCAA AAGAAGCTTT AGAAAGAGAA AAACCGACAT GGCCCATGCT GACCGTTTTG GATGAGGCCT GTAATGCCTG CGTAAAAAGT AAATACATGA TTACAAACGC TTGTCAAGCC TGCGTTGCCC GTCCATGCAT GATGAACTGC CCTAAAACCG CTATAGCGAT TTCGGGAGGA AGAGCCCGTA TTGATGAAGA AAAATGTATA AACTGCGGTA TCTGTCTAAA AAACTGCCCC TACCATGCAG TTATAAAAAT TCCCGTTCCG TGTGAAGAAG CCTGTCCGGT GGGCGCTATC TCAAAAGACG AAAACGGAAA AGAAAGAATC GATTACCATA AATGTATTTT TTGCGGAAAC TGTATGAGAG AATGTCCTTT TGGTGCCATG ATGGATAAGG GGCAGATTGT GGATGTCATA AAACATTTAA TGAGCGGGAA AAAGGTTTCC GCCCTCTATG CCCCTGCGGT TGCAGCCCAG TTTAAGGCCG TTCCGGGACA GCTTGAGTCT GCCTTAAAAA AGGCCGGTTT CAATAAGGTC TGGGAAGTAG CTATAGGTGC GGACATAACG GCTGACCGTG AAGCTTCCGA GTTTGAAGAG AGAATGGAAC ACGGCCATAT CTTAATGACT ACCTCCTGCT GTCCTGCCTA TGTCAGGGCA GTAAAAAAAC ATGTTCCGGC CCTTGTTCCC TGTATCTCGG ATACAAGAAG CCCGATGCAC TATACGGCCG AATTGGCAAA AAAAGAAGAT CCTGATTGCG TTACGGTATT TATAGGTCCC TGTCTTGCAA AAAGGAGAGA GGGCTTGGAA GATGAGTTTG TAGACTATGT TTTGTCGATA GAAGAATTGG GAGCCTTGCT TACTGCCAAG GAAATAGATA TTTCCAAGGA AGAAGCCTTG CCCGGAAAAA TTACGCCGAC CTCTTCGGGA AGAGGCTTCG CAGCCTCAGG CGGTGTTGCC GAAGCTGTAA GAGTTCGCCT TAAAAAACCT GAGAACCTCC GCCCCGTGCT TATAAACGGC CTTAATAAGG AAGGAATGAA ACAGCTTGCC TCTTATGGTA AAATTCAAAG CGGAGAGCTT CCTCATGATT CGTCCACGCC CAACCTTGTA GAAGTTATGT CATGTGAAGG CGGCTGCATA GGCGGGCCTT CGGTTATCAC AAACCAAAAA CTTGCTGCAA GCCAACTAAA AAAATACGCA GACGAAGGAC TTTCTTATTC GAGAGAAAAA GATTTAATGT AG
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Protein sequence | MLNINNNTSN IKREILVRIA KLQFEGKLQE GVHYIPREMV PRNSTPIRCC IFHDREIMRH RVIARLGCSL ENYDEEKTLA QFAKEALERE KPTWPMLTVL DEACNACVKS KYMITNACQA CVARPCMMNC PKTAIAISGG RARIDEEKCI NCGICLKNCP YHAVIKIPVP CEEACPVGAI SKDENGKERI DYHKCIFCGN CMRECPFGAM MDKGQIVDVI KHLMSGKKVS ALYAPAVAAQ FKAVPGQLES ALKKAGFNKV WEVAIGADIT ADREASEFEE RMEHGHILMT TSCCPAYVRA VKKHVPALVP CISDTRSPMH YTAELAKKED PDCVTVFIGP CLAKRREGLE DEFVDYVLSI EELGALLTAK EIDISKEEAL PGKITPTSSG RGFAASGGVA EAVRVRLKKP ENLRPVLING LNKEGMKQLA SYGKIQSGEL PHDSSTPNLV EVMSCEGGCI GGPSVITNQK LAASQLKKYA DEGLSYSREK DLM
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