Gene TDE1277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1277 
Symbol 
ID2740570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1310821 
End bp1312302 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content44% 
IMG OID637160155 
ProductFe-hydrogenase large subunit family protein 
Protein accessionNP_971884 
Protein GI42526786 
COG category[R] General function prediction only 
COG ID[COG4624] Iron only hydrogenase large subunit, C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000478337 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAACA TAAATAATAA CACATCTAAT ATCAAAAGAG AAATTCTTGT ACGTATTGCA 
AAGCTCCAGT TTGAAGGGAA GCTTCAAGAA GGAGTTCACT ATATTCCGAG AGAAATGGTT
CCGCGAAACA GTACGCCTAT AAGGTGCTGT ATTTTTCATG ACAGAGAAAT AATGAGGCAT
CGGGTAATTG CAAGGCTCGG CTGTTCTTTG GAAAATTATG ATGAAGAAAA GACCTTGGCT
CAATTTGCAA AAGAAGCTTT AGAAAGAGAA AAACCGACAT GGCCCATGCT GACCGTTTTG
GATGAGGCCT GTAATGCCTG CGTAAAAAGT AAATACATGA TTACAAACGC TTGTCAAGCC
TGCGTTGCCC GTCCATGCAT GATGAACTGC CCTAAAACCG CTATAGCGAT TTCGGGAGGA
AGAGCCCGTA TTGATGAAGA AAAATGTATA AACTGCGGTA TCTGTCTAAA AAACTGCCCC
TACCATGCAG TTATAAAAAT TCCCGTTCCG TGTGAAGAAG CCTGTCCGGT GGGCGCTATC
TCAAAAGACG AAAACGGAAA AGAAAGAATC GATTACCATA AATGTATTTT TTGCGGAAAC
TGTATGAGAG AATGTCCTTT TGGTGCCATG ATGGATAAGG GGCAGATTGT GGATGTCATA
AAACATTTAA TGAGCGGGAA AAAGGTTTCC GCCCTCTATG CCCCTGCGGT TGCAGCCCAG
TTTAAGGCCG TTCCGGGACA GCTTGAGTCT GCCTTAAAAA AGGCCGGTTT CAATAAGGTC
TGGGAAGTAG CTATAGGTGC GGACATAACG GCTGACCGTG AAGCTTCCGA GTTTGAAGAG
AGAATGGAAC ACGGCCATAT CTTAATGACT ACCTCCTGCT GTCCTGCCTA TGTCAGGGCA
GTAAAAAAAC ATGTTCCGGC CCTTGTTCCC TGTATCTCGG ATACAAGAAG CCCGATGCAC
TATACGGCCG AATTGGCAAA AAAAGAAGAT CCTGATTGCG TTACGGTATT TATAGGTCCC
TGTCTTGCAA AAAGGAGAGA GGGCTTGGAA GATGAGTTTG TAGACTATGT TTTGTCGATA
GAAGAATTGG GAGCCTTGCT TACTGCCAAG GAAATAGATA TTTCCAAGGA AGAAGCCTTG
CCCGGAAAAA TTACGCCGAC CTCTTCGGGA AGAGGCTTCG CAGCCTCAGG CGGTGTTGCC
GAAGCTGTAA GAGTTCGCCT TAAAAAACCT GAGAACCTCC GCCCCGTGCT TATAAACGGC
CTTAATAAGG AAGGAATGAA ACAGCTTGCC TCTTATGGTA AAATTCAAAG CGGAGAGCTT
CCTCATGATT CGTCCACGCC CAACCTTGTA GAAGTTATGT CATGTGAAGG CGGCTGCATA
GGCGGGCCTT CGGTTATCAC AAACCAAAAA CTTGCTGCAA GCCAACTAAA AAAATACGCA
GACGAAGGAC TTTCTTATTC GAGAGAAAAA GATTTAATGT AG
 
Protein sequence
MLNINNNTSN IKREILVRIA KLQFEGKLQE GVHYIPREMV PRNSTPIRCC IFHDREIMRH 
RVIARLGCSL ENYDEEKTLA QFAKEALERE KPTWPMLTVL DEACNACVKS KYMITNACQA
CVARPCMMNC PKTAIAISGG RARIDEEKCI NCGICLKNCP YHAVIKIPVP CEEACPVGAI
SKDENGKERI DYHKCIFCGN CMRECPFGAM MDKGQIVDVI KHLMSGKKVS ALYAPAVAAQ
FKAVPGQLES ALKKAGFNKV WEVAIGADIT ADREASEFEE RMEHGHILMT TSCCPAYVRA
VKKHVPALVP CISDTRSPMH YTAELAKKED PDCVTVFIGP CLAKRREGLE DEFVDYVLSI
EELGALLTAK EIDISKEEAL PGKITPTSSG RGFAASGGVA EAVRVRLKKP ENLRPVLING
LNKEGMKQLA SYGKIQSGEL PHDSSTPNLV EVMSCEGGCI GGPSVITNQK LAASQLKKYA
DEGLSYSREK DLM