Gene TDE1267 details

Gene Information

• Locus tag: TDE1267
• Symbol: purD
• ID: 2740560
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: -
• Start bp: 1301717
• End bp: 1303030
• Gene Length: 1314 bp
• Protein Length: 437 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637160145
• Product: phosphoribosylamine--glycine ligase
• Protein accession: NP_971874
• Protein GI: 42526776
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0151] Phosphoribosylamine-glycine ligase
• TIGRFAM ID: [TIGR00877] phosphoribosylamine--glycine ligase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00682849
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACATAC TGCTTGTCGG ATCAGGCGGA AGGGAACATG CAATAGCTTT AAAGCTAAAA 
GAATCACCTT CTCTCGGTAA ACTTTTTATA GCACCCGGAA ACGGAGGCAC GGCTCTTTTG 
GGTGAAAACG TTCCCATAAA GGCCGACAAT ATCGAAGGAC TTGCCGATTT TGCTCTTTCT 
GCCTCAATAG ACCTTGTAAT TGCAGGCCCC GAGGTTCCTC TGTGTTTAGG TTTCGAAGAC 
CTGATAAAAG AAAAAGCAAA AGCTCAAAAC AAAAAAATAG CATTTTTCGG GCCGTCAAAG 
GCTTGTGCCC GATTGGAAGC CTCTAAAGAT TTTTCCAAAG AGATGATGAG CCTTCTTTCC 
ATTCCAACGG CAAGATATTC TTCTTTCACA GATTTTCAAA AAGCAAAAAA ATATATTGAA 
GGCTTGGACT ACCCCTTTGT AATAAAGGCT GACGGCCTTG CGGCAGGAAA AGGTGTTATC 
CTGCCTGACT CAAAAGAAGA AGGCATAGCC GAACTTAAAA ATATAATGAT CGAAAAACAA 
TTCGGAACTT CAGGCGACAA GGTAGTTATT GAAGAACGCC TTGAAGGAGA AGAGGTTTCC 
ATCCTTGCCT TTTCGGACGG AGAAAAAATA GCCGTAATGC CGCCCTCGCA AGATCACAAG 
CGGCTTAAAG ACAATGATGA AGGCCCGAAC ACCGGCGGCA TGGGAGCCTA TGCCCCTACT 
CCGATTTGCT CATACGAAGA AGCCGAAAAA TATGCGGCTC TTACAATTCT TCCCATTGTA 
AAAGAAATGA AAAAAAGAGG CACGCCCTAC ATCGGGGTTC TCTATGCGGG CATCATGCTT 
ACAAAGGACG GCAAGGGCTT TACACCCAAG GTGCTTGAAT ATAACTGCCG ATTCGGAGAT 
CCCGAAACCC AAGTCTTAAT GCAGCTTTTT GACGGAGACC TAGCCCTAAC CATGAGTTAT 
TGTGCAGAAG GAAGGCTCGG GGAAGCTATG CCTAAATGGA AAAAAGGCTA TGCGGCAACC 
GTAGTGCTTG CAAGTGAAGG CTATCCTCTT TCTTCATCAA AACCGGTAGA ATTGTCCGCT 
TCGGAATTGG AAGGTTCCGC TGAGGTGAGC GTAATACATG CAGGCACAGC CCTTAAAGAC 
TCCAAAATTT TCGCATCGGG CGGAAGGGTT CTTTGTATAA GCTCAAATGA TAAGAGCTTA 
CAAAAAGCTA TGGATAATAT CTATGAAAAA ATAAAAACCA TACATTTTCC CGGAGTGCAG 
TACAGAAAGG ACATTGCAAA ACGCGGACTG GAACATCTAA ATCAACTTAA ATAA 

 

Protein sequence

MNILLVGSGG REHAIALKLK ESPSLGKLFI APGNGGTALL GENVPIKADN IEGLADFALS 
ASIDLVIAGP EVPLCLGFED LIKEKAKAQN KKIAFFGPSK ACARLEASKD FSKEMMSLLS 
IPTARYSSFT DFQKAKKYIE GLDYPFVIKA DGLAAGKGVI LPDSKEEGIA ELKNIMIEKQ 
FGTSGDKVVI EERLEGEEVS ILAFSDGEKI AVMPPSQDHK RLKDNDEGPN TGGMGAYAPT 
PICSYEEAEK YAALTILPIV KEMKKRGTPY IGVLYAGIML TKDGKGFTPK VLEYNCRFGD 
PETQVLMQLF DGDLALTMSY CAEGRLGEAM PKWKKGYAAT VVLASEGYPL SSSKPVELSA 
SELEGSAEVS VIHAGTALKD SKIFASGGRV LCISSNDKSL QKAMDNIYEK IKTIHFPGVQ 
YRKDIAKRGL EHLNQLK