| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1261 |
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| Symbol | |
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| ID | 2741437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1295733 |
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| End bp | 1297301 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637160139 |
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| Product | choline/carnitine/betaine transporter family protein |
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| Protein accession | NP_971868 |
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| Protein GI | 42526770 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0177229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAACA CCGGAGATGA ACTGGGTGTA AAGGAACTTG AGTTAAAGGA TAAAAATGAA
ATTGATTGGC TTATAACCGT ATTACCCCTT GCAGTAATAA TCTGTCTGAC GGGATTGGTT
CTCTTTTTTC CTGTAGAATC GATGAAGGTA GTTGATGCTC TTTGGTCTGT TTTTGTAAAT
AAGCTGGGCT TTTTCTATAT TTTGCTCGGC TTGGGCCTTG TTTTTACTGC CATAGGTTTA
GCCTTTTCAA GATTCGGAAC TGTAAAACTG GGGAATCTTG AAAAACCTCG ATACGGAAAT
TTTACATGGG GGGCTATGAT TTTTACCTCG ACTATGGCAG CCGATATTCT TTATTGGTCG
CTGATAGAGT GGGCCTATTA TTTTGGTGAA AGTCCCTTCG GTCTGTCTTC TCTTTCACTG
GCAGAAAGAC AGGATTGGGC CGCGGCCTAT CCTCTATTCC ATTGGGGAAT AACACCGTGG
GCTTTTCATA TAGTGCCTGC CGTAGCCTTT GCTTATATGC TTCATGTCAA GGGAAGAACA
AAGCAAAAGC TGTCCGAAAG CTGCCGTCCT ATTTTTGGGG ACAGGATTGA CGGCCCTATA
GGAAAGATGA TAGACGTTTT TTCGGTAATA GGCTTATTGG CCGGAACTGC TACAACATTC
TCGCTTGCAA CTCCTCTTTT GTCTTTGGCT GTGTCCACTA TTTTTGGAAT ACCTCAAGGA
AAGATTTTGA CTCTTGTCAT TCTTCTGATA ATAGCTGCCG TCTACACGGC TGCCGTTTTA
TTGGGCTTAA AAGGGATTTC TCAGCTTGCA AAGATTTCGG TTGTTTCTTT TTGTGTTCTT
TTAGGCCTTG TCTTTATAGC CTCGCCCAAA ATCTACATAA TTGAGACCAG CATAACCGGT
ATCGGCAAGG TTATTCAAAA CTTTTTCGGC ATGTCCACAT GGATGGACCC ATTGCGTATT
TCCGGAGAAG GAGGGGCCGG CTTCCCGCAA AACTGGACAA TATTTTATTG GGCTTATTGG
ATAGCTTGGT TTGTTGCAAC TCCTTTCTTT ATAGGAAAAA TTTCAGAAGG CCGTACAATA
AAGAATACCA TAATCGGCGG TCTTATCTGC GGTATAGCGG GGACTTATTG TTCTTTTATA
ATCCTTGGAA ATTACGGGCT TCATTTACAG GCTCACGGAA TATTTGATGC AGCGTCCGCA
ATAAAGGAAA CGGATGCTTC TCAAGTTATC CTACAAATTC TTAACACCCT TCCTTACGCA
AAAATTGTTT TGGGCATTTT AATAATTACG ATGATAGCCT TTTATTCCAG TACCTTTGAT
GCAATTACTC TTGTAATAGC TTCCTATTCT CAAAAGAATT TGGAAAAACA TACCGAGCCT
AAAAAAGGCT TGAGAGCCTT TTGGGCTGTA GTCTTTGTAA TGCTTCCCGC AGCCTTAATC
CTTGTGGGAA CTAATTTAAA CCAGCTTCAA AGTCTTTCGA TTATAGCCGC CTTTCCTTTG
GGAATTATAA TAATACTGAT AGTGATAAGT CTTTTTAAGG AACTAAAACA TAACGGAGGG
TATAGGTAG
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| Protein sequence | MMNTGDELGV KELELKDKNE IDWLITVLPL AVIICLTGLV LFFPVESMKV VDALWSVFVN
KLGFFYILLG LGLVFTAIGL AFSRFGTVKL GNLEKPRYGN FTWGAMIFTS TMAADILYWS
LIEWAYYFGE SPFGLSSLSL AERQDWAAAY PLFHWGITPW AFHIVPAVAF AYMLHVKGRT
KQKLSESCRP IFGDRIDGPI GKMIDVFSVI GLLAGTATTF SLATPLLSLA VSTIFGIPQG
KILTLVILLI IAAVYTAAVL LGLKGISQLA KISVVSFCVL LGLVFIASPK IYIIETSITG
IGKVIQNFFG MSTWMDPLRI SGEGGAGFPQ NWTIFYWAYW IAWFVATPFF IGKISEGRTI
KNTIIGGLIC GIAGTYCSFI ILGNYGLHLQ AHGIFDAASA IKETDASQVI LQILNTLPYA
KIVLGILIIT MIAFYSSTFD AITLVIASYS QKNLEKHTEP KKGLRAFWAV VFVMLPAALI
LVGTNLNQLQ SLSIIAAFPL GIIIILIVIS LFKELKHNGG YR
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