Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1260 |
Symbol | |
ID | 2741436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1294168 |
End bp | 1295736 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637160138 |
Product | cholinephosphate cytidylyltransferase/choline kinase |
Protein accession | NP_971867 |
Protein GI | 42526769 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis [COG4750] CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00193493 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATAATG CAATTATTAT GGCTGCCGGT TTCGGTTCGC GTTTTGTTCC CTTAACCTAT GCGACACCTA AGGGCTTGTT GGAAGTTTTT GGGGAAAGGA TGATTGAAAG GCAAATTGAA CAGCTGAAAG CTGCCGGTAT CGACGACATA ACGATAGTTG TCGGCTATTT AAAGGAAACC TTTGAATATC TTATAGATAA GTACGGCGTA AAGTTTGTAT ATAACCCCGA TTTTAAGAAT AAAAACAATC TTTCCACCCT TTACCATGTA AGGGATGAAC TTAAAAGCAC CTATATTCTT TCGAGCGATA ATTGGCTTAG GGAAAACATG TATCATTCCC ATGAGTATGA TTCATGGTAT TCTTCCGTTA AGGTAGCCGG AAAAACGAAG GAGTGGATAT TAAAATTAGG CCTGCACGAT AAAATTATGG ATGTAAAAGT CGGAGGACGA AACGGCTGGG TTATGTACGG CCCCGTATAT TTTTCAAAAG AATTTTCCGA TAAGATACGC CCTTTGATTG AAGAAGCCTA TGAAAGAGAT GATACCGATG ATTGGTACTG GGAAGATGTC TATATGAGGA ACATAAAAGA ATTAACTATG TTTGCAAACA AGCAGGGTGA TCACCAAGTA TATGAATTCG AATCCCTTGA CGAAATTCGC CTCTTTGACT CTTCCTATCT TATTTCCTCC CATGATAAAT GGCTTGAGCT TATATCGGAT GTATTTAAAC GTCCTGAGCA CAGCATCACA AATCTAAAAC CTTTAAAATT CGGAATGACA AACAAATCGT TTTTGTTTGA ATTTGAAGGT GAAGAATATA TTTTTAGAAT ACCGGGAGAG GGAACCGAGG CCCTTATAAA CAGAAAGGAA GAATATGAGG TCTACAAGGC TATTTCTCCT TTAAACTTAA GCGATTCCAT TATTTATTTT GATCCTGAAA AGGGGGTAAA AATTACCAAG TTTATTCCCA ACTCCCATAC TGCGGATGCC CGTAATCCTG AAGACTTAAA AAAATGTATG AAGGTAGCCC GCCGTCTGCA TGAGTCCGGC TTAAAGGTTG CGCATTCTTT TGATCTACGT GAACGGATAA ATTATTACGA AAAAATTGCA AACGAAAAAA ACGGTATCTT CTATCATGAC TACCACGAGG TTAGACTTTT GATGAATGAG CTTTTGGAAT TAATTGAAAA TACGGAAAAG CCTCATGTTT TATGTCATAT AGACCTTGTT CCCGACAATT TTATAATAAA CGGAAACGAT GTCCATTTAA TTGACTGGGA ATATGCCGCT ATGTGCGATC CCCTCATAGA TATAGCTATG TTTGCCATAT ATGCTCATTA TGATAATGAA GAGCTTGAGA ATTTGATGTC TTTTTATTTT GAAAGGCCCG TAAAAGAAGA GGAAAGAATG CGTATCTATT GTTATGTTGC TCTTTCAGGC TTTTTATGGG CTCTTTGGAC TTGCTATAAG GAGGCTTTGG GGGTAAGCTT TGGAGATTAC GGCTTAAAGA TGTACCGATA TGCAAAGGAT TATTATAAAA AAATAAAAGA ACTAGGAGGT AATCTATGA
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Protein sequence | MDNAIIMAAG FGSRFVPLTY ATPKGLLEVF GERMIERQIE QLKAAGIDDI TIVVGYLKET FEYLIDKYGV KFVYNPDFKN KNNLSTLYHV RDELKSTYIL SSDNWLRENM YHSHEYDSWY SSVKVAGKTK EWILKLGLHD KIMDVKVGGR NGWVMYGPVY FSKEFSDKIR PLIEEAYERD DTDDWYWEDV YMRNIKELTM FANKQGDHQV YEFESLDEIR LFDSSYLISS HDKWLELISD VFKRPEHSIT NLKPLKFGMT NKSFLFEFEG EEYIFRIPGE GTEALINRKE EYEVYKAISP LNLSDSIIYF DPEKGVKITK FIPNSHTADA RNPEDLKKCM KVARRLHESG LKVAHSFDLR ERINYYEKIA NEKNGIFYHD YHEVRLLMNE LLELIENTEK PHVLCHIDLV PDNFIINGND VHLIDWEYAA MCDPLIDIAM FAIYAHYDNE ELENLMSFYF ERPVKEEERM RIYCYVALSG FLWALWTCYK EALGVSFGDY GLKMYRYAKD YYKKIKELGG NL
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