Gene TDE1252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1252 
Symbol 
ID2741428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp1286540 
End bp1287154 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content31% 
IMG OID637160130 
Productputative lipoprotein 
Protein accessionNP_971859 
Protein GI42526761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.360764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAAAA TAAATAAAAT AATCTGTATA AGTATCCTTA TTTTTTTGAT ATCCTCTTGT 
AGTAAAGTTG ATAGGGCCAG GCTTAATTTT CTTTCGGGAT ATATTGCATG GAAACAAAAT 
GATTGGAATA AGGCTGCATC AAACTTTTTT AAATCGATAG ACCTGAGTGA AGAGGTTGAA 
GATGTAAAAA TAAAAGACTA TTCGGATTTT GCAATCGGCT CCATTTACCT TATGCAAAAT 
GAAGATGCTT CAGCTCTTTC CCGTTTTGAA AAGATAAATG AAAATACGGA TAAAAATTTG 
AATTCCTATA TTTATTATCA AAAAGGAATA ATAGCATTTA AAAATCATGA ATATGAAAAG 
GCTGTAAGGC TTTTTAAAAA ATCTCTGGAA CTTAAACCGG ATAGTGTTGA TGCTAAGATT 
AATTTCGAGC TTAGTATGCG TTATCAAAAA AAACAAAAGG AAAAACTTCC TAATTCTAAA 
AGTGCTGCCG TTATTGAAAA TAAAGAAGCC GATTTATTGG AAAAGACGAT TTTAAATTTA 
ATACGGCAAA AGGAGAAAGA ACAATGGCAA AAGAAAGAGC AAGAAAACAA GCAGCCTCAG 
GCATTCGATT ATTGA
 
Protein sequence
MVKINKIICI SILIFLISSC SKVDRARLNF LSGYIAWKQN DWNKAASNFF KSIDLSEEVE 
DVKIKDYSDF AIGSIYLMQN EDASALSRFE KINENTDKNL NSYIYYQKGI IAFKNHEYEK 
AVRLFKKSLE LKPDSVDAKI NFELSMRYQK KQKEKLPNSK SAAVIENKEA DLLEKTILNL 
IRQKEKEQWQ KKEQENKQPQ AFDY