Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1248 |
Symbol | |
ID | 2741424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1282736 |
End bp | 1283680 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637160126 |
Product | hypothetical protein |
Protein accession | NP_971855 |
Protein GI | 42526757 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAACAG GTTTTATCGC AGAAAGGGCA AAACAGCTTA AAATCTCTTC TCTTTCGATT TCCGAAGGCC TACGTTCAGG CGGCTTCAGT TCGGCTTTTC GCGGGCAGGG TATAGAATTT GACTCAGTGC GGGAATATGA AACGGGAGAT GATGTGCGCT CTATAGATTG GAACCTTACG GCGCGGAGCG GTAAGACCTA TGTTAAGATG TACCGTGAAG AAAGAGATTT AAGCATTTTT ATCTGTGTAG ATTTTTCTCT TTCGATGGAG CCGGGGCTCG ATAAAATCAG TCCTAAGGAA AAAGCTATCG AAACGGCAGC TCTTTTAGCC TTTGCGGGGA GGAATATATT TTCTCCTGTC GGAGCCCTTT TTTTTGATGG AGAAAAAGGC CCCTTGTTTA TTCCTAGAAC GGGAGAAGAG CATATTTTGA CCATATTAAA ATCTATGGAA GATTTTGCCT TTTGCAAAAA TCGAAAACCG GTACGGGGAA CACAGATTGC GTCTGCGATG ACAGCCGCCT CTAAGATTTT GCGTTCACGT TCCTTGGTAA TAATCATTTC GGATTTTAAG GTTGAGGGTT ATGAAAAGGA GCTTGGGCTC TTGGCGGCAA AACATGATGT TGTTTGCCTT AAGATAAGCG GATCTATGGA TTCTTTTTTG CCGGAAGCCG GATCTATAAG ATTTAAAGAC CCTGAAACCG ATTTTAGAAT GCTTTTGCCT ACGGGCTCTA AGACCTTTCA GATGGAATAT AAAAAGAATT TTACTGAAGA AATATCAAGG TGGGAAAATA CCTGTAAGCA TTCCCTTGCA AATCCTGTTT TACTCGATGT AAATGACGAT ACCGTAAAAG TATTGGGTGA CTTCTTTTTG TCGAAACAAA GCAATCAGCG TGTTTTAAAA AATAATTTAG CTAAGTTCGG AGCGGATGGA TGGAAGGCAT TTTAA
|
Protein sequence | MKTGFIAERA KQLKISSLSI SEGLRSGGFS SAFRGQGIEF DSVREYETGD DVRSIDWNLT ARSGKTYVKM YREERDLSIF ICVDFSLSME PGLDKISPKE KAIETAALLA FAGRNIFSPV GALFFDGEKG PLFIPRTGEE HILTILKSME DFAFCKNRKP VRGTQIASAM TAASKILRSR SLVIIISDFK VEGYEKELGL LAAKHDVVCL KISGSMDSFL PEAGSIRFKD PETDFRMLLP TGSKTFQMEY KKNFTEEISR WENTCKHSLA NPVLLDVNDD TVKVLGDFFL SKQSNQRVLK NNLAKFGADG WKAF
|
| |