| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1241 |
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| Symbol | |
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| ID | 2741183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1272409 |
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| End bp | 1274712 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637160119 |
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| Product | HD domain-containing protein |
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| Protein accession | NP_971848 |
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| Protein GI | 42526750 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1480] Predicted membrane-associated HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0121163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAGA ATAAAAAAGA AAGTAAATTT AAACAAAAAA TATCTTTTCT CAGTGTGATA
TTTAAAAGAA ATAAGGCCTT TGTTACAGCG GTTGCGGTAA GCTTTTTGGT TTTGGCTGTA
ATGATTTATC TCAATGCTTA TGAAAATTCG GGATTTTCCA AATTGACTAT TTCCGATTTT
GAAGTCGGAA TGGTTTCCGA CAGGGATGTA ATATCAAACC GTAATATTGA GGTGATTGAT
GAAAAAGCTA CAGAAATAAG AAGAGTTGCA GCTAAACATT CCGTCAGGGC GGTTTTTTAT
AAGGATGACT CGGTTTCGGA AAAAATGATA AGAGAGTACT CCGAATTTGC GAGTTATATA
ATAGGCCTAA AAGATTCGGC AAAGAGTTTT ACGGCTTTTA AATTTATGGT TATGGAAAAA
TATCCTGTTC TTCTTTCAGA AAATGATTTG GAAAGCATAT ATAAGGCTGT TGATTTTTAT
GAGATTACCT CTGTTTCGCT CAATATGTTA AAACAGCTTT TCGATATCGG CATAATAGAG
ATGCCTCTTA CAGGCCTTGG AGAATTAAAT GATGCCGAAA TAAGTCTGAG GACAAGCCAA
GACCAAAAGC TGTCATCTAC AAACGTATTT CTTGCGAACC TTGTTTTATT TTATAATGTG
AGAGATAGGA TTAAAACTTT TCTTTCCGAT GTAAAAAAAT CAAAACTTGA ATCCTATGTG
TTGAGTATTG TGCTTCCATT TGCCCAGCCT AATATTTTAT TTGATACCGA AGAAACCGAA
AAAAGAGTAG ATGAGGCCTT AAAAAAGGTT ACTCCTGTAA AAATAAATAT AGAAAAAAAT
CAAAAGATTA TAAAAAGAGG ATTTATAATA TCTGAAGATG CCTATACACG TTTAAAAGCC
TACGCAGGGG ACGGAAGATA CATAGATTTT AGCCAGATTG CTGCTGCTCT AATTTTTTTA
ACCTTATCTG TTATAATCAG CCTATTTTTG TTTTCCAAAA AAATTATCGG GGAAAGTTTG
GATGTTAAAT TCAATCTGCT TATTTTAATC TCCTTTGATT TGATATATAT TTTAATTCTT
TTCCTTTCAA GGCTTTCGAT ATTTGCATAT CCTCTTGATA TTGTTCCCAT ATTGCCGGTT
ACTTTTTTGA CCATGCTTAT CGCTGCTTTA ATTTCAAGAA AAATTTCCGT ATTTGCCGTT
TTTGTTTTTT CTCTTGCCGT TTTCGGTGCA ACAGGTTTTA AAATTCAGCC GGCCATGTTT
GCTATCCTTT CAGGTCTTGC CGGAGCCGGT ATGGTAAATA TTAAGGGCCG AAGGATGGAT
CTGATTAAGA CTGCCTTAGG TTTAATCTTG GTGCAGCCTA TAATTTTACT CTGTATGTTT
GCTATTTTCC CGGGCTCTGC AAGCGAGAAA TCGGTGCTTT TATTGAGCAC TGCGGGGAGC
GGTTTTATAA GTGGTATTTT GGTTTTGGGC TTTTTGCCGA TTTTAGAAAC CTTGATGAAT
GTTCCTACAA GTTTTAGACT GATGGAACTG TCCGACCTTA ATTCTCCAAT TATGAAAAAA
ATGCTCATAA CGGTTGCGGG AACTTATAAT CATTCGATGA TGGTTGCTTC CTTGGCCGAA
AGTGCATGCC GTGAGATAGG AGCAAATTCG ATTTTAGCCC GTGTAGGAGC TTATTATCAC
GATATAGGAA AGATGGAGCA GGGCGAATAC TTTGTAGAAA ATCAGACAAA TTATAATAAG
CATATGGATA TAAATCCCCG CCTTTCGGCT ACGGTAATAA GAAGTCATGT AAAAATAGGT
ATTGAAAAAG CAAAGCAATT ACGGCTTCCT CAGCCGGTTA TAGATATAAT CTCCGAGCAT
CACGGAAACA GCTGTATATC CTATTTTTAT GCAAAGGCAA AAGAACTTGA TCCAAATGTA
GATATCGAAG ACTTTTGTTA TCCCGGAATA CCTCCGCGCT CAAAGGAGTC GGCTGTTGTC
ATGCTGGCCG ATATAGTTGA GGCTGCATGC CGTACCTTGG AAAAACCTTC GGTTCCCCGT
TTGGAAAAAT TTATAGATGA GCTTGTTTCC GGAAAGATAA AGTCAGGTCA GCTTGATAAC
TCTGAGCTTA CTTTCCGCGA AGTCAGAATA ATCAAGGCCG CTTTCGTAAA AATTTTAGCC
GGTTACTATC ATTCCAGAAT AGAATATCCG AATCAAAAGA ATGTTGATGA TGATGAGGGA
ACAAAGCCGC AGAATAAAAA CGGTCAAAAA CTAGAGGTTG AAGCTTCTCA GGTACAGCCT
CAAAAGGAAA ATCATAATGT CTAA
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| Protein sequence | MIKNKKESKF KQKISFLSVI FKRNKAFVTA VAVSFLVLAV MIYLNAYENS GFSKLTISDF
EVGMVSDRDV ISNRNIEVID EKATEIRRVA AKHSVRAVFY KDDSVSEKMI REYSEFASYI
IGLKDSAKSF TAFKFMVMEK YPVLLSENDL ESIYKAVDFY EITSVSLNML KQLFDIGIIE
MPLTGLGELN DAEISLRTSQ DQKLSSTNVF LANLVLFYNV RDRIKTFLSD VKKSKLESYV
LSIVLPFAQP NILFDTEETE KRVDEALKKV TPVKINIEKN QKIIKRGFII SEDAYTRLKA
YAGDGRYIDF SQIAAALIFL TLSVIISLFL FSKKIIGESL DVKFNLLILI SFDLIYILIL
FLSRLSIFAY PLDIVPILPV TFLTMLIAAL ISRKISVFAV FVFSLAVFGA TGFKIQPAMF
AILSGLAGAG MVNIKGRRMD LIKTALGLIL VQPIILLCMF AIFPGSASEK SVLLLSTAGS
GFISGILVLG FLPILETLMN VPTSFRLMEL SDLNSPIMKK MLITVAGTYN HSMMVASLAE
SACREIGANS ILARVGAYYH DIGKMEQGEY FVENQTNYNK HMDINPRLSA TVIRSHVKIG
IEKAKQLRLP QPVIDIISEH HGNSCISYFY AKAKELDPNV DIEDFCYPGI PPRSKESAVV
MLADIVEAAC RTLEKPSVPR LEKFIDELVS GKIKSGQLDN SELTFREVRI IKAAFVKILA
GYYHSRIEYP NQKNVDDDEG TKPQNKNGQK LEVEASQVQP QKENHNV
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