| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1236 |
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| Symbol | tpiA |
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| ID | 2741178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1269626 |
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| End bp | 1270378 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637160114 |
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| Product | triosephosphate isomerase |
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| Protein accession | NP_971843 |
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| Protein GI | 42526745 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000124491 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAAAGT TTTACATTGC GGCAAATTGG AAGATGAATA TGAATAGGGC TGAGGCCAAG
CAGCTTGCAA CAGAAATGAA GGCCGGCCTA AAAGACGGAA AAAATAAGTA CATGATAGCT
CCTTCATTTA CTCTTCTGCA AGATGTTGCG TCCGTGCTTA AAGGCTCCAA TATCTTGCTG
GGTGCTCAAA ATATGGGATT GGAAGAAAAG GGCGCTCATA CCGGGGAGGT TTCCGTTCTT
CAGCTTTTGG ATGTAGGTGT TCAAGCCGTA ATTTTAGGCC ATTCCGAAAG AAGGCATATA
TACAAGGAAA CAGATGACCT TATCAATAAA AAGGTAAAAC TTGCATTAAA ACACGGTCTT
GAAGTTATCC TCTGTGTGGG AGAGCTTCTC GAAGAGCGTG AAGCCGGCCA TGCCGAAGCC
GTATGCGAAA GGCAGATTAA AAAAGGACTT GCTGAGGTTT CTGCAAAAGA TTTGGATAAG
GTAACGATTG CTTATGAGCC TGTTTGGGCA ATAGGAACGG GAAAAAATGC GAGCCCTGAG
GATGCTGATG CCATCCATTC TTCAATAAGG AAGACCTTAG CCGCTCTTTA CGGAGAAAAA
GCTGCTAAAA ATATGATAAT CCAGTACGGA GGCTCTATGA AACCTGAAAA TGCCGCCGGT
CTTTTAAAAA AGCACAATAT TGACGGAGGC CTAATAGGCG GAGCCGGTCT TAAAACGGAA
ACATTTTTGC CTATAGCCTT GTTTTCCGAG TAG
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| Protein sequence | MKKFYIAANW KMNMNRAEAK QLATEMKAGL KDGKNKYMIA PSFTLLQDVA SVLKGSNILL
GAQNMGLEEK GAHTGEVSVL QLLDVGVQAV ILGHSERRHI YKETDDLINK KVKLALKHGL
EVILCVGELL EEREAGHAEA VCERQIKKGL AEVSAKDLDK VTIAYEPVWA IGTGKNASPE
DADAIHSSIR KTLAALYGEK AAKNMIIQYG GSMKPENAAG LLKKHNIDGG LIGGAGLKTE
TFLPIALFSE
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