| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1225 |
|---|
| Symbol | troB |
|---|
| ID | 2741167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Treponema denticola ATCC 35405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002967 |
|---|
| Strand | - |
|---|
| Start bp | 1258841 |
|---|
| End bp | 1259608 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637160103 |
|---|
| Product | zinc ABC transporter, ATP-binding protein |
|---|
| Protein accession | NP_971832 |
|---|
| Protein GI | 42526734 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACAG GTGCAGAACA TTTAAAAGAG AACTTAATTC CGGCTTTTTG TGTTGAAGAC
CTTACCTTGG CTTACCGCGA AAAGCCTGTA CTATGGGACA TAGATGTATG CGTACCCCAA
GGAGCAATGG AGGCTGTAGT CGGCCCCAAT GGAGCCGGAA AATCCACCCT TCTTAAAGCA
ATGATGGGTA TTCTTCCTAT AGCATCGGGA GAAATAAAAA TATTCGGAAA ATCATATAAA
TCTCAAAGAA AAAGAATAGC CTACGTACCG CAAAGAAGTT CGGTAGATTG GGATTTTCCG
ACAACGGTCT TTGATGTTGT TTTAATGGGT TCATATGGAA ATTTAGGATG GATAAAAAGA
CCGGGGCAAA AGGAAAAAAA AGAAGCTATG TCAGCCTTGG AAAAGGTAGG AATGCTTGAA
TTTGCAAAAC GTCAGATAAG CGAACTTTCA GGCGGCCAAC AGCAAAGAGT TTTTTTGGCA
AGGGCTCTCG TTCAAAATGC GGATCTTTAT TTTATGGATG AACCATTTCA AGGAGTCGAT
GCAGCTACCG AACAGGCTAT TGTAAAACTT TTAAAAGAAC TAAAGGAAAA TGGGAAGACT
CTTTTGGTAG TCCATCACGA TCTTCAAACC GTAAAGGATT ACTTTGATCG GGTACTCTTA
TTGAATGTAA GATTAATAGC TGAGGGAAGT ATTGAAGAAG TTTTTACCGA AGAAAACTTA
CGCAAAACTT ATGGAGGCAG AATAGCCTAT AATTCTGAAA AAAAATGA
|
|---|
| Protein sequence | MNTGAEHLKE NLIPAFCVED LTLAYREKPV LWDIDVCVPQ GAMEAVVGPN GAGKSTLLKA
MMGILPIASG EIKIFGKSYK SQRKRIAYVP QRSSVDWDFP TTVFDVVLMG SYGNLGWIKR
PGQKEKKEAM SALEKVGMLE FAKRQISELS GGQQQRVFLA RALVQNADLY FMDEPFQGVD
AATEQAIVKL LKELKENGKT LLVVHHDLQT VKDYFDRVLL LNVRLIAEGS IEEVFTEENL
RKTYGGRIAY NSEKK
|
|---|
| |