Gene TDE1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1223 
SymboltroD 
ID2740117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp1256825 
End bp1257925 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content36% 
IMG OID637160101 
Productzinc ABC transporter, permease protein 
Protein accessionNP_971830 
Protein GI42526732 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATGG AAATAATATT AATTGCAATT ATTGTCTCTG CCTCATGTGC TCTCTGCGGA 
GTATTTCTAG TCTTAAGGAG AATGTCTTTG ATGGGTGATG CAATAAGCCA TTCTATCATA 
ATAGGAATCG TATTAGGCTT TTTTATAAGT AAAACCTTAT CTTCAAGCAT ACCATTGATA 
GGAGCCGTTA TAGCCGGAAT GGCCTCGGTT ATCTTTACCG AAGTCTTGCA AAAGACAAAA 
CTTATAAAAA GCGATGCAGC CATAGGGCTT GTTTTTCCAT TTTTATTCAG CCTTGGAGTT 
ATTTTGGTTT CACTCTATGC AGGAAATGTT CATTTGGATA CGGATTCGGT TTTATTGGGA 
GAATTAGCCT TTGCACCCTT TGACCGTATA AGTTTTTTTT CGGTTTCATT CCCAAAAAGC 
TTGGTTCAAA TGATCTGTAT TCTTTTATTC GATTTTGTTT TTATCGTAGT TTTTTTTAAA 
GAATTAAAAC TGACAACATT TGATCCTAAC TTAGCAAAAT CATTAGGCTT TTCACCTTCA 
ATTATGCATT ACGGTCTAAT GTTTGCAGTG AGCCTTACCT GTGTGGGTGC ATTTGATTCG 
GTTGGAGCCG TTTTAGTTAC AGCCTTGATG ATTGCACCTG CCGCTGCAGC CCTATTATTA 
ACAAACAGTC TTTTTTATAT GATAATAATT TCAATTGTTA TTGCTTCGGC ATCATCGATA 
TGCGGCTTTT ACCTTGCAGT AAAAATAGAC GGAAGTATAT CCGGCTCAAT GGCTGCAATG 
ACAGGCGTCT TTTTTTTACT TGCCTACCTA TTCTCTCCAA AAGACGGATT GGTAAAACGA 
AGGGCCGAAC AAAAAAATCT AAAAATAGAT TTTGCCGTAA AAATGCTCAT TGTTCATCTT 
CTGCACCATC AAGGTAAAGA AAATATGATC AGTGAGTGTA GAGAAGAACA TTTATGTGAA 
CACATTAACT GGACGGAAAA AAAGGCCCAT GCAGTAGTAT TTGCAGCAAA ACGGCTGGGA 
TATATAAAAA AAGAAAACGG TTTACTTCTT TTGTCTCCAT TAGGAAGACA GGAGGCGGAA 
AAATCAATAA CAAATATTTA A
 
Protein sequence
MNMEIILIAI IVSASCALCG VFLVLRRMSL MGDAISHSII IGIVLGFFIS KTLSSSIPLI 
GAVIAGMASV IFTEVLQKTK LIKSDAAIGL VFPFLFSLGV ILVSLYAGNV HLDTDSVLLG 
ELAFAPFDRI SFFSVSFPKS LVQMICILLF DFVFIVVFFK ELKLTTFDPN LAKSLGFSPS 
IMHYGLMFAV SLTCVGAFDS VGAVLVTALM IAPAAAALLL TNSLFYMIII SIVIASASSI 
CGFYLAVKID GSISGSMAAM TGVFFLLAYL FSPKDGLVKR RAEQKNLKID FAVKMLIVHL 
LHHQGKENMI SECREEHLCE HINWTEKKAH AVVFAAKRLG YIKKENGLLL LSPLGRQEAE 
KSITNI