Gene TDE1219 details

Gene Information

• Locus tag: TDE1219
• ID: 2740113
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1252011
• End bp: 1252475
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 637160097
• Product: flagellar protein FliJ, putative
• Protein accession: NP_971826
• Protein GI: 42526728
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2882] Flagellar biosynthesis chaperone
• TIGRFAM ID: [TIGR02473] flagellar export protein FliJ

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGGT TTGAGTTTCG GCTTGAAAAA CTTTTGAACT TACGCGAATT TTATGAACAT 
CAGGCAGAAA TTGACTTGGC TCATGCCATT GCTCATAAAG ATTATATAGA TCTGCAATTA 
AAGCAGATTG CTAAGTTAAA AGTAAAAACA GGTACCGAAT TTAATCCTGA GACCGATAAA 
ATTGATATAA CCGATCTTCA TAATGCCCAA AATTATATTA TACTCTTAGA TAAAAAAAAG 
GATGAATTAT TAGAAAAACT AGTTCTTGCA GAACAAATTA TTGAAGAAAA AAGAAAGATT 
TACATTGAGG CTGCATCAAA ACGCAAAGTA ATTTCAAAAT TAAAAGAAAA AAAACGGGCG 
CTATGGGAAA AAGAAAATAT AAAAGCGGAA GAAACATATA TCGATGATAT TGTTACTTAT 
AAATTCGGTC AAAATAAAAC AATTGCAGTT AATAACTATA ATTAA 

 

Protein sequence

MKRFEFRLEK LLNLREFYEH QAEIDLAHAI AHKDYIDLQL KQIAKLKVKT GTEFNPETDK 
IDITDLHNAQ NYIILLDKKK DELLEKLVLA EQIIEEKRKI YIEAASKRKV ISKLKEKKRA 
LWEKENIKAE ETYIDDIVTY KFGQNKTIAV NNYN