Gene TDE1210 details

Gene Information

• Locus tag: TDE1210
• Symbol: hslV
• ID: 2740104
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1243469
• End bp: 1244005
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637160088
• Product: ATP-dependent protease peptidase subunit
• Protein accession: NP_971817
• Protein GI: 42526719
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCAAA AAATAAGAAG CACTACGGTG ATTGCCGTAA GGAAAGACGG AAAAATTGTT 
ATGGCCGGAG ACGGACAGGT AACCATGGGC GAAACAGTTA TGAAGGGAAA TGCCCGAAAG 
GTAAGAAAAA TTTATGACGG AAAAATTATA ACGGGCTTTG CCGGGGCAAC GGCCGATGCC 
TTTACTCTTT TGGAAAAGTT TGAAATCAGG GTAAAAGAAT TTTCAGGAGA CCTGACCAGA 
GCTGCGGTAG AGCTTGCAAA AGATTGGCGC ACCGATAAGA TGCTCAAAAA CTTACAGGCC 
CTTTTACTTG TAGCCGACTC AAAGACTACT CTTTTAATTT CGGGAAACGG AGATGTTATC 
GAGCCGGAAG AAGATGTGCT TGCAATAGGC TCCGGAGGAA ATTATGCTTA TGCTTCGGCT 
TTGGCTTTGA TGCAAAACAC AAATCTTTCC GCCCGTGAAA TTGCGGAAAA GAGTTTACAG 
ATTGCAGGAA AGATATGTAT TTACACAAAC GGAAAAATAA TTACGGAGGA AATATAA 

 

Protein sequence

MSQKIRSTTV IAVRKDGKIV MAGDGQVTMG ETVMKGNARK VRKIYDGKII TGFAGATADA 
FTLLEKFEIR VKEFSGDLTR AAVELAKDWR TDKMLKNLQA LLLVADSKTT LLISGNGDVI 
EPEEDVLAIG SGGNYAYASA LALMQNTNLS AREIAEKSLQ IAGKICIYTN GKIITEEI