| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1209 |
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| Symbol | |
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| ID | 2740103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1242485 |
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| End bp | 1243402 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637160087 |
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| Product | phage integrase family site specific recombinase |
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| Protein accession | NP_971816 |
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| Protein GI | 42526718 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.764611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGAAG TATTTGAAAG CTACCTCACC TATAGTGCGG GAGTAAGGCA ATTTACAAAA
GCAACAATAG ATTCTTATAA AAACGATTTG ATTATTTTTG AAGAATGGCT AAAGGAGCTT
GACTTAAATA TTTTTGAATT AAAGGCTTCG GACATCAGGA TTTTTATTGC GGAACTTGCA
GATAAAAAAA TTGCTCCGGC TTCAATTAAC CGAATGATGT CTACGCTAAG AGGTTTTTAT
AAATATGCTC TAAGGTTTAA TCTGACAAAA ATGAACCCTA TATCTTCTGT AAGGAATTTA
AAACTTGCTC AAAAACTTCC TGTGTTTATG TTTCCAAAAC AGGCACAAGA GTTTTGTCGG
CTGCCTTCAA ATGCCGGTAT TCTTTGGGAA ACAAGGGATG CTGCCTTATT TGCTTCTCTT
TATTCTACCG GCTGCCGTGT TTCGGAATTA GCCGGACTCG ATATAAAAGA TTTGGATAAA
ACGCTTTCTT ATGCCATTGT TTTTGGAAAA GGTAAAAAGG AAAGAAAGGT GTTTTTTGCA
GAATTTGCAA AAGAATATTT GAGAGAGTAT TTAAAAGAAA GGTCTGACTT GGTTGAAAAG
TTTAAAGGCC AAGTTCAAAA AGACGGCAAG GGAAAAATTA GGGATACTCT TTTTATAAAT
CAAAAAGCTC AACCCTTAAC AAGCAGGGGA ATTCGGTATA TAATAGACAG ATATGTTGAG
TTATCTCCCG AATTAAAACA TCTTTCACCC CACGCTTTTA GACATAGTTT TGCATCGACA
TTGATTACAC GCGGAGCGGA TATAAGGGTT GTACAAGAAT TGCTTGGACA CGAAAGTGTT
TCGACCACGC AAAGATATAC GCATATTACG GCTGAGCAGC TTCAAAATTT ATATAAGACT
GCTCATCCTC ATTCATAA
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| Protein sequence | MNEVFESYLT YSAGVRQFTK ATIDSYKNDL IIFEEWLKEL DLNIFELKAS DIRIFIAELA
DKKIAPASIN RMMSTLRGFY KYALRFNLTK MNPISSVRNL KLAQKLPVFM FPKQAQEFCR
LPSNAGILWE TRDAALFASL YSTGCRVSEL AGLDIKDLDK TLSYAIVFGK GKKERKVFFA
EFAKEYLREY LKERSDLVEK FKGQVQKDGK GKIRDTLFIN QKAQPLTSRG IRYIIDRYVE
LSPELKHLSP HAFRHSFAST LITRGADIRV VQELLGHESV STTQRYTHIT AEQLQNLYKT
AHPHS
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