| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1200 |
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| Symbol | murF |
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| ID | 2741161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1231758 |
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| End bp | 1233188 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637160078 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | NP_971807 |
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| Protein GI | 42526709 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.13257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAGAG AAAACTTAAG CAATAATTTA GACTATTCTC TTATGAATCT TGATGAATTG
CTTACAAGTA CCGGTGCATG GCTTGTTTAT GAATCTAATT CCTCTAAAGC GTTTTCTTCT
GTAGTCATGG ACAGCCGTAA TGTAAAAAAT AATTCTCTCT TTATTCCTTT ACGAGGTGAA
AATCAGGACG GGCATGTTTA CATAGAGCCT GCTTTAAAGA ATGGAGCTAA ATTTTTTGTT
GTTGACTTTG ATTATCTTGA TGAAAATGAA ACTGCATTAT TGTCATTGTG CAAAAACTAT
GATGCTTCAT GTGTTGCCGT AAAAAATAAT TTAAAAGCCT TACAGGATGC TGCAAGATAT
TATTTGTCGA AATTTCCCAA TCTTTATAAA ATAGGTATTA CGGGGTCAAG CGGTAAAACA
ACTACAAAAG AAATTTTGGC TTCTATATAT TCTAAAAAAT ATAATACCGT ATCGACAAAG
GGTAATTTAA ATTCCGAAAC AGGTTTACCT CTTTCCGTTT TTGAAGTACG GCCCGAACAT
GAAGCCGGAA TATTTGAGCT TGGCATGAAC CGTAAGGGGG AGATAGCCGA AATAGCAAGC
GTTCTTTTAC CAAACGCCGC TATAATTACA AACATAGGAA CTGCCCATAT CGGTATTCTC
GGCACAAAGC AGGCAATTGC TGAGGAAAAA AAAGAAATTT TTTCTTTTTT TAAAGATGAC
TCTTTAGGCT TTATTCCTGA ATGTGAATTT ACGGATTTCT TAAAAGATAT TCCTCATGGT
TCTGTTTTTA CGGTTTCAGA TAATGATTCT TCATTGGTGC AAAAGGTTGA AGATGCCGGT
GTATTGGGTT CTAAAATTTT TTATAAAGGA GAAGAAATTT TATTCCCATT ACCCGGAGTG
TATAATGTAA AAAATGCTCT TTTATGTATA GCCTTGGCGG AAAAAAAAGG TTTTTCGGCT
AAGGAAATTA AATCGGGTTT AGAAGCCGTG CGGCCTCTGT TTGGTAGATC GCAGGTCTTG
CACGGCTTTG TAACCTATTT TTTGGATTGC TATAATGCAA ATCCCGACTC GATGAAAAGT
GCAATAGAGT TTTGTGATTC TATAAATACC GAATGTGCAA AACATTATGT TTTGGCATCT
ATGCTTGAGC TGGGGGCTGA ATCCGACTAT GAGCATAAAA AAATAATTGA AGATGCATTA
AAATCAAATG CCGATAATTT ATACTTTTTT GGAGATGATA TTTGTTCCGC TTTTGAAGGT
ATGAACGTTT CTTCTTCAAA AAAAATATAT AAGTTTAAAA CAAATCAATT CGATGCATTA
AAAGAACAGC TTAAAGAAAA TTTGTCTAAA GATGATTTTG TTTTATTAAA AGGTTCAAGA
TCAATGGAAC TTGAAAGATT GGAATCCGTT TTAAAAGAAG GGGAGATTTA A
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| Protein sequence | MVRENLSNNL DYSLMNLDEL LTSTGAWLVY ESNSSKAFSS VVMDSRNVKN NSLFIPLRGE
NQDGHVYIEP ALKNGAKFFV VDFDYLDENE TALLSLCKNY DASCVAVKNN LKALQDAARY
YLSKFPNLYK IGITGSSGKT TTKEILASIY SKKYNTVSTK GNLNSETGLP LSVFEVRPEH
EAGIFELGMN RKGEIAEIAS VLLPNAAIIT NIGTAHIGIL GTKQAIAEEK KEIFSFFKDD
SLGFIPECEF TDFLKDIPHG SVFTVSDNDS SLVQKVEDAG VLGSKIFYKG EEILFPLPGV
YNVKNALLCI ALAEKKGFSA KEIKSGLEAV RPLFGRSQVL HGFVTYFLDC YNANPDSMKS
AIEFCDSINT ECAKHYVLAS MLELGAESDY EHKKIIEDAL KSNADNLYFF GDDICSAFEG
MNVSSSKKIY KFKTNQFDAL KEQLKENLSK DDFVLLKGSR SMELERLESV LKEGEI
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