Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1188 |
Symbol | pntB |
ID | 2741149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | - |
Start bp | 1214664 |
End bp | 1216712 |
Gene Length | 2049 bp |
Protein Length | 682 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637160063 |
Product | NAD(P) transhydrogenase, beta subunit |
Protein accession | NP_971796 |
Protein GI | 42526698 |
COG category | [C] Energy production and conversion |
COG ID | [COG1282] NAD/NADP transhydrogenase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00625225 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGATA CGGTTTATTA TATTATTTGC GGAGTACTCA GCATTGGGGT TCTTTTAGGA ATCAATATGA TGAGTAAGGT TAAATCGGCA GTTAAGGGAA ACCGTTTAAG TGCCCTTTGT ATGCTCGCAG CCGTATGCGT AACCCTTTAT AAATATAATA TATTCTCTGC AGGAATGATG TGGGCAGGGC TTGCGATAGG AGCGGCAATC GGTATTTACC TAACAATAAA GGTAGAAATG ATTACCATGC CCCAAACAGT TGCCTTACTC AACGGCTTAG GCGGAGCAGC TTCGGCTGTT GCAGCCCTCT TAACTCTCGC AGCGGTTAAT ACTCAAGCAG GAATATTTGC TATTGTTACA GGAGGAATAG CCTTAGCAGT AGGAGCTTTA ACCTTTTCAG GCAGCTTAAT AGCTGCAGGA AAGCTTCACA AGCTTCTTCC TCAAAAACCC ACGGTTCTGC CTGCTCATCA GGCTTTGACC ACAGTCAGCT TTTTAGGAAT GATAGCCTTC ATCGTTCTTC TTCCTATTAA ACCTGAACTA ATGATAATCA TTTCGGTTGC AGGGCTTGTA ATAAGCCTGC TTTTCGGCAT CTTCTTTGCT ATACGCGTAG GCGGAGCGGA CATGCCGATT ACGATTTCTC TTTTAAACTC AACATCGGGT GTTGCGGCCT CAATTGCAGG TATGGCGATA GGAGATATTC TCTTGGTATC GGTAGGAGGC ATAGTCGGAG CTTCGGGGCT CCTGCTTACC CAGATTATGT GCAGGGCAAT GAATAGGAGC CTAGCTTCAA TTCTTTTCAG TAAGGCGGCT TCTCCGGCTA AACCGGCAAA ACCTGCACAG CCTGCAAGCC CTTCAGAATC TTCATCAAAA GAAGCGTCAG AGAAACAAGC TCAGCAAACG GGAGAAGCAA AACCTGCTCA ACAAGAGCTT ACGGCAACAG GACATGCCGA TAAATCGCAG CTTACCTCAT GGTTTAATGA TGCTAAGGAA ATCATCGTTA TCCCCGGCTA CGGCATGGCT CTTTCACAAG CCCAAGGCTT GGTAAAACAG CTGGCAGATA AACTTGAATC TATGGGAAAA AATGTGCGTT TTGCCATTCA CCCCGTTGCA GGAAGAATGC CCGGCCATAT GAATGTGCTT TTATGCGAAG TTGACATTCC CTATGACAAG CTCTACGAAA TGGAAGCTAT AAATCCGGAC TTTGATAAGA CGGATTTGGC TATAATCATA GGAGCAAGCG ATGTTGTAAA CCCCGCCGCA AACACGGCAG AAGGTACACC CATCTACGGA ATGCCGGTCT TGGCTGCAGA AAAAGCTAAA AAGCTAATCA TCTGTAACTT TGACCTACAG CCAGGCTATG CGGGAGTTCC AAATCCCTTG TATGAACCTA ATCCCAACAC CATGATGCTC TTAGGCGATG CAAAGGATAG CATAAACACC ATGCTCGACT CTCTTAGAAC TAAGGGAGGA ACCGCAGGAA GCTCTTCAGG CGGAGAATCC GCCAACTCAG GAGCGGAAGT AAGCCAAAAA CAAGCCGGAA CGGAAGCTCA AATAGGCCCT TGGTTTAAGG AAGCAAAGGA AATCATCGTT ATACCCGGCT ACGGCATGGC TCTTTCACAG GCTCAAGGCT TGGTAAAACA GCTTGCAGAT AAACTTGAAT CTATGGGAAA AAATGTGCGT TTTGCCATTC ACCCCGTTGC AGGAAGAATG CCCGGCCACA TGAATGTGCT TTTATGCGAA GTTGACATTC CCTATGACAA GCTCTACGAA ATGGAAGCTA TAAATCCCGA CTTTGATAAA ACGGATTTAG CCATAATCAT CGGGGCAAGC GATGTTGTAA ACCCCGCCGC AAACACGGCA GAAGGCACGC CCATCTACGG AATGCCGGTC TTGGCTGCAG AAAAAGCTAA AAAGCTAATC ATCTGTAACT TTGACCTACA GCCAGGCTAT GCGGGAGTTC CAAATCCCTT GTATGAACCT AATCCCAACA CCATGATGCT CTTAGGCGAT GCAAAGGATA GTTTAAACAA GATATTGGAA AATCTATAA
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Protein sequence | MTDTVYYIIC GVLSIGVLLG INMMSKVKSA VKGNRLSALC MLAAVCVTLY KYNIFSAGMM WAGLAIGAAI GIYLTIKVEM ITMPQTVALL NGLGGAASAV AALLTLAAVN TQAGIFAIVT GGIALAVGAL TFSGSLIAAG KLHKLLPQKP TVLPAHQALT TVSFLGMIAF IVLLPIKPEL MIIISVAGLV ISLLFGIFFA IRVGGADMPI TISLLNSTSG VAASIAGMAI GDILLVSVGG IVGASGLLLT QIMCRAMNRS LASILFSKAA SPAKPAKPAQ PASPSESSSK EASEKQAQQT GEAKPAQQEL TATGHADKSQ LTSWFNDAKE IIVIPGYGMA LSQAQGLVKQ LADKLESMGK NVRFAIHPVA GRMPGHMNVL LCEVDIPYDK LYEMEAINPD FDKTDLAIII GASDVVNPAA NTAEGTPIYG MPVLAAEKAK KLIICNFDLQ PGYAGVPNPL YEPNPNTMML LGDAKDSINT MLDSLRTKGG TAGSSSGGES ANSGAEVSQK QAGTEAQIGP WFKEAKEIIV IPGYGMALSQ AQGLVKQLAD KLESMGKNVR FAIHPVAGRM PGHMNVLLCE VDIPYDKLYE MEAINPDFDK TDLAIIIGAS DVVNPAANTA EGTPIYGMPV LAAEKAKKLI ICNFDLQPGY AGVPNPLYEP NPNTMMLLGD AKDSLNKILE NL
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