Gene TDE1157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1157 
Symbol 
ID2741489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp1192130 
End bp1193383 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content42% 
IMG OID637160031 
Productphage terminase, large subunit, putative 
Protein accessionNP_971765 
Protein GI42526667 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTT TAGCCGGTTG CAATAAGCAT AGGGAGAACT GGAGAGGTAT TTTATTCCGT 
AGAACCTATA AAGAATTGGA AGATATTATC GTAAGGGCTA AAGAGCTCTA TATTCCGATG
GGAGCGGTTT ATAAAAAAAC CGATAATATT TTTAATTTTC CGACAGGTTC ATTTTTAAGA
TTGAGGTACT TGGAAAGAGA TGATGATGTA AGCAATTATC AGGGGCACCA ATATACATGG
ATAGGCTTTG ATGAGTTAGG CAATTATTCA AGCGATTATT GCTGGAGGTA TATGATGAGC
CGATGCCGAA GTGCTAAGGG TATTCCTTGT TATATGAGAG GAACGGGAAA CCCCGGAGGC
GTAGGGCACG GCTGGTTAAA GAAAAGGTTT ATTGATAATC AAAACCCGAA TACAATCTAT
ACGGATGAGG ACGGGAATAC AAGATGTTTT ATTCCGAGCA GATTGGACGA TAACGATTAT
TTAATAAAGA ACGATAAAGG TTATGAAAAG CGGTTAAGGC TTTTGCCAAA GTATCTTTAT
GAGGCTTTAA GAAAAGGTAA CTGGGATATT ATAGCCGGTA GTGCTTTTGA GGAGTTTAGC
CGAGAAAGCC ATGTGATTAA ACCTATAGCT CTTGATCCGG GTGTGTGGTT TAAGTTTTGT
TCCATGGACT GGGGATATTC AAGGCCTTTC AGTATAGGCT GGTGGGCAGT TTCAAGGGAC
GGCCGGATGA TTAGATACCG TGAGCTTTAC GGCTGTGAAA ATGGAGAAGC CAATAAGGGG
GTAAGGCGAA GTGCGAGCAG TATTGCAAAA GAAGCTTACG CCTTATCCAT TGCCGAAGGT
GTAAATACGA TGGTTGCCGA TCCCGCAGTT TGGGGCAAAA CGGATGACGG GCCTACAATA
GCAGATAAGT TTGAAGTTGA AGGCTGGAAA CTGATCAAGG CTGATAACGA TAGGATTAAC
GGCAAGATGC AGTTCCATCA ATTATTAAAG AGTAAGGGAG AGGACGGGAA GCCTATGCTT
TTAGTCTTTG ATACCTGCTT TGATTTTATA AGGACTATAC CGCTATTACT TCCAAGCACT
ACGAGGCCGG AAGATATAGA CACTACATTG GAGGATCATA TTTATGATGA AACACGTTAT
GCGATTATGA GCGAATACGC AAGGCACCCA GGCAGGGCCT TAGAAAAACA AAACGGGCAA
TGGAATTTTA AAAACAAGCG GACAAGAGGC GCAAGCTTTG ATCCGTATGG GTAA
 
Protein sequence
MDFLAGCNKH RENWRGILFR RTYKELEDII VRAKELYIPM GAVYKKTDNI FNFPTGSFLR 
LRYLERDDDV SNYQGHQYTW IGFDELGNYS SDYCWRYMMS RCRSAKGIPC YMRGTGNPGG
VGHGWLKKRF IDNQNPNTIY TDEDGNTRCF IPSRLDDNDY LIKNDKGYEK RLRLLPKYLY
EALRKGNWDI IAGSAFEEFS RESHVIKPIA LDPGVWFKFC SMDWGYSRPF SIGWWAVSRD
GRMIRYRELY GCENGEANKG VRRSASSIAK EAYALSIAEG VNTMVADPAV WGKTDDGPTI
ADKFEVEGWK LIKADNDRIN GKMQFHQLLK SKGEDGKPML LVFDTCFDFI RTIPLLLPST
TRPEDIDTTL EDHIYDETRY AIMSEYARHP GRALEKQNGQ WNFKNKRTRG ASFDPYG