Gene TDE1124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1124 
Symbol 
ID2739540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp1155586 
End bp1156263 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content34% 
IMG OID637159998 
Producthypothetical protein 
Protein accessionNP_971732 
Protein GI42526634 
COG category[R] General function prediction only 
COG ID[COG2129] Predicted phosphoesterases, related to the Icc protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TTCTATGTAT TTCGGATCAG ATAGACCCTG TGATTTACAG TAAAGACATA 
AAAGAAAAAT ATGGAGATGT AGATTTTATA ATATCGGCGG GAGACCTTCC GATAGACTAC 
CTTGACTTTG TACAAAATTC CTTAAATAAA CCGCTTTATT TTGTTTTCGG AAGCCACCAC 
TTAAAAGCTC TTACTCACTA TCATCCCGAA ATGGCTGAAA AAACAAAGGA TGGAGAGGTA 
AATATATTTA AAAAGGGAAA TACAAAAAAA AGCAATCAGG GAACCTATAT AGGGTTTAAA 
AGCCTTAAGT ATGAAAACAT TATAATAGCC GGCGTTTCAG GTGCTAAAAA GCACAATGAC 
GGTAAAAATC AGTTTACAGA AAAACAAATG AAGCGAAAGC TTTCAAAAAT GATTCCGGCA 
TTATTTTTAA ATAAGCTGAG ATACGGGCGC TATTTGGATA TCTTAGTAAC CCACTGTCCT 
CCATTGATTG AAGGTGAAAA AGAAGAAAAC AAACAAGAAG CTTTTGAGTG TTTTACCAAA 
TTTATAAATT TTTTTAAACC TAAATATCTT ATACACGGAC AAGTCCACAT ATATGACCCT 
CAACAATGCC GAAGCATAAG ACATGGAGAA ACCGAAATAA TTAACGCATA CAGCAGACAC 
ATTTTGGAGA TAACTTAA
 
Protein sequence
MKKILCISDQ IDPVIYSKDI KEKYGDVDFI ISAGDLPIDY LDFVQNSLNK PLYFVFGSHH 
LKALTHYHPE MAEKTKDGEV NIFKKGNTKK SNQGTYIGFK SLKYENIIIA GVSGAKKHND 
GKNQFTEKQM KRKLSKMIPA LFLNKLRYGR YLDILVTHCP PLIEGEKEEN KQEAFECFTK 
FINFFKPKYL IHGQVHIYDP QQCRSIRHGE TEIINAYSRH ILEIT