| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1118 |
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| Symbol | tpl |
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| ID | 2739534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | - |
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| Start bp | 1149972 |
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| End bp | 1151351 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637159992 |
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| Product | tyrosine phenol-lyase |
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| Protein accession | NP_971726 |
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| Protein GI | 42526628 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3033] Tryptophanase |
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| TIGRFAM ID | [TIGR02618] tyrosine phenol-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTA AAAATTATCC TGCGGAACCT TTTAGAATTA AGGTTGTAGA AACTGTTAAG
ATGATCGATA AGGATCAAAG AGCAAAGGTT GCCAAAGAAG CCGGTTATAA TACCTTCCTT
ATTAATTCGG AAGATGTTTA TATCGACCTT CTTACCGACT CCGGAACAAA CGCCATGAGC
GATAAACAAT GGGCCGGAAT GATGATAGGA GATGAAGCCT ATGCCGGAAG CCGCAACTTT
CATCACTTGG AAGAAACGGT TCAAGAGATT TTCGGCTTTA AGCATCTTGT GCCGACCCAT
CAAGGCCGCG GTGCCGAAAA CCTTCTTTCA AGGATAGCCA TTAAACCCGG TCAATATGTA
CCCGGCAACA TGTATTTTAC CACTACCAGA TACCATCAGG AAGCAAACGG CGGTATCTTC
GTGGATATCA TAAACGATGA TGCTCATGAT GCAGGCAAAA ATGTTCCTTT TAAAGGCGAC
ATCGACTTGA ACAAGCTTGA AAAGCTTATA AAAGAAAAGG GAGCCGAAAA TATAGCCTAT
GTATGTTTGG CTGTTACGGT AAACCTTGCA GGCGGTCAGC CCGTTTCTAT GAAGAACATG
AAGGCCGTCC GTGAGCTTAC AAAAAAGCAC GGCATCAAGG TATTCTACGA TGCAACCCGC
TGTGTAGAAA ACGCCTACTT TATCAAAGAA CAAGAAGCCG GTTATGCCGA CAAGTCTATC
AAAGAAATCG TAAGAGAAAT GTTCAGCTAT GCAGACGGAT GTACCATGAG CGGTAAAAAA
GACTGTATCG TAAACATCGG AGGCTTCCTC TGTATGAACG ATGAAGATCT TTTCCAAGCT
GCAAAAGAAT TCGTTGTTGT ATTTGAAGGT ATGCCTTCAT ACGGCGGTAT GGCAGGACGC
GATATGGAAG CTATGGCTAT CGGTCTAAAA GAAGCTCTCC AGTTTGAATA CATCGAACAC
CGAATCAAGC AGGTCCGCTA TTTAGGCGAC AAGCTCTTGG AAGCCGGAGT TCCTATTATT
GAGCCCGTAG GAGGACATGC AGTATTTCTT GATGCAAGAC GCTTCTGTCC TCATCTTAAG
CAAACCGAAT TTCCCGCACA GGCCCTAGCC GCAGAGCTTT ATATCGAATC GGGAGTTAGA
AGTATGGAAC GCGGTATCGT TTCTGCAGGA CGCGATCCCA AAACAAGGGA AAACCACGTA
CCAAAGCTTG AAACAGTCCG CTTAACAATT CCGCGCCGTG TTTATACATA TAAACACATG
GACATTGTAG CAGATGCCGT TATTAAATTG TACAAACACA AGGAAGTTAT AAAAGGATTA
AAGTTCGTTT ACGAACCTAA ACAACTCCGC TTCTTTACGG CACGCTTTGA GCATATCTAA
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| Protein sequence | MDIKNYPAEP FRIKVVETVK MIDKDQRAKV AKEAGYNTFL INSEDVYIDL LTDSGTNAMS
DKQWAGMMIG DEAYAGSRNF HHLEETVQEI FGFKHLVPTH QGRGAENLLS RIAIKPGQYV
PGNMYFTTTR YHQEANGGIF VDIINDDAHD AGKNVPFKGD IDLNKLEKLI KEKGAENIAY
VCLAVTVNLA GGQPVSMKNM KAVRELTKKH GIKVFYDATR CVENAYFIKE QEAGYADKSI
KEIVREMFSY ADGCTMSGKK DCIVNIGGFL CMNDEDLFQA AKEFVVVFEG MPSYGGMAGR
DMEAMAIGLK EALQFEYIEH RIKQVRYLGD KLLEAGVPII EPVGGHAVFL DARRFCPHLK
QTEFPAQALA AELYIESGVR SMERGIVSAG RDPKTRENHV PKLETVRLTI PRRVYTYKHM
DIVADAVIKL YKHKEVIKGL KFVYEPKQLR FFTARFEHI
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