Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1110 |
Symbol | |
ID | 2739526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1144412 |
End bp | 1145731 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637159984 |
Product | putative lipoprotein |
Protein accession | NP_971718 |
Protein GI | 42526620 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAGA CCTTATATAA AATTACGGCT TTGGTTATTT TTAGTTTTTT TGTTTTTTCG TGTTCCGAAA AGGAAGAACA AGTAGGGGTT GAAAATAAGG AAGCTCAATC TGAGGTCGGC TCTCAGGCCG GACTTAATTC CGAAAAAAAA GATAATGGGC TTCAATCGGG GCAGGATAAG ACAAAAACGG CTGATGCCCA ATATCAAAAA GCCTTAAATG AGGCTTCCGT TATTTTTGAA TTTGAGGCTG TAAATAAAAA AATCAATTTA AGCCTTAAAG CCGATGAAAA TATCAAAATT GAAGGTGCCG TTCCTTCGGA AATTCCTGCC GACGGTTCCG TAAACGAAAT ATTTATAGCA AAAAATTCTC TTGCCCTATT GGGTGATGTA AAAGAGCTTA CAATTCATAA TGCCGAAATT TTAAGCGGAG TTAAAATAAT TAAAGCGCCT GCTTTGAAGT CCTTGGATAT CTCTTTTTCG GGCTTAAAGA ATATCGAATT TATAGATTGT AAGGCTCTTG AAAATCTGAT TCTTGAAGGA AACAAGAAAA TGAATAAGCC TGATTTTTCT TCGTTAAAAG GCTTAAAAAA GCTCAATTTG GCCAAAACAA CAATTCGGGA GATGGATTTT TCTGTTTTTC CGCGACTTGA ATGCCTTGAT ATAAGTTCGA TAAGCTTAAA AAAGCTTGAT CTTACAAAAA ACATTGAGCT TAAAGAGCTG GATTGTGAAA ATTCCGGTTT AAACACTCTT GATTTAACTA AAAATATAAA ATTACAACGG CTTAATTGCA GGGCCAACAA ACTTACCGAC TTGGCGCTTT TTCAAAACAA AGAGCTCAAG TTTTTGGATT GCGGAAAAAA TAATCTTGAT AAACTTTTAA TAGCTCTTAA CACAAAACTT CAAAAACTGT ATTGTGACTC CAATGAAATA AAGGATTTGG ATCTTCCTTC GTTAAAGGAA CTTGAAGAGC TTTATTGTTA CCGCAACAAG ATAGAGAATC TTGTCGTAGG TTCAAATCGT AAGTTAAAAA ATCTTTTTTG CTTTGAAAAT AAGATTAATG AAAAATCAAT GAAGCAGCTC TTTGATTCTT TGATAGCAGG TGACGGATAT GATATTAAAA CCCTTGTAGT TTATGCCGAA AAAAATCCCA ATCTAACATA CAAAGCGGAT AAATACTTTG ACCATAATTT TGTGCCTACC GAAGAAATGC TTAATTCTTC CTCCTTTAAA TTCTGGAAAG TTTATTTTAC CCTTTATGGT CTTGAAGATA TGGGCAGTAT AATCGACTCC CTTGTTCAAA AAACGGGAGA AGCTTTTTAG
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Protein sequence | MLKTLYKITA LVIFSFFVFS CSEKEEQVGV ENKEAQSEVG SQAGLNSEKK DNGLQSGQDK TKTADAQYQK ALNEASVIFE FEAVNKKINL SLKADENIKI EGAVPSEIPA DGSVNEIFIA KNSLALLGDV KELTIHNAEI LSGVKIIKAP ALKSLDISFS GLKNIEFIDC KALENLILEG NKKMNKPDFS SLKGLKKLNL AKTTIREMDF SVFPRLECLD ISSISLKKLD LTKNIELKEL DCENSGLNTL DLTKNIKLQR LNCRANKLTD LALFQNKELK FLDCGKNNLD KLLIALNTKL QKLYCDSNEI KDLDLPSLKE LEELYCYRNK IENLVVGSNR KLKNLFCFEN KINEKSMKQL FDSLIAGDGY DIKTLVVYAE KNPNLTYKAD KYFDHNFVPT EEMLNSSSFK FWKVYFTLYG LEDMGSIIDS LVQKTGEAF
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