Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TDE1109 |
Symbol | |
ID | 2740239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Treponema denticola ATCC 35405 |
Kingdom | Bacteria |
Replicon accession | NC_002967 |
Strand | + |
Start bp | 1143220 |
End bp | 1144389 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637159983 |
Product | pyridoxal-dependent family decarboxylase |
Protein accession | NP_971717 |
Protein GI | 42526619 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGAA AGGATTACAT TAGCGATTCT GAGTGGAAAC ACTTTATGAG TTTTTCAGAA AATCTGGAAA CGCCCTGTGT TGTTATCAAC CTAAAAACAA TCAAAAAAAA TTATCAAAAG TTAAGAGAAA ATTTTCCCTA TGCGGATATT TTTTATGCGA TTAAGGCTAA TCCGCATGAA GAAATTATTT CAATGCTAAA CGAGATGGGT TCATGCTTTG ACATAGCTTC ACGTTATGAA CTTGACAAGG TTCTAAAATT AGGCGTAAGC CCTGAAAGAC TCAGCTACGG AAACACCATA AAAAAGGCAA AGGATATTGC TTATTTTTAT GAAAAGGGTG TCAGAATGTT CGCTACGGAC AGTAAGGACG ACCTTAAAAA TATAGCTCAA TTTGCTCCCG GTTCGAGAGT TTATGTGAGA ATCCTTGTTG AAAACACTAC CAGTGCCGAC TGGCCTTTGT CAAGAAAATT CGGCTGCCAT CCCGATATGG CCTATGACCT TTGCATTCAG GCCAGAGATT CGGGCCTTAT TCCTTACGGT ATTTCTTTCC ACGTAGGAAG CCAGCAGCGG GACATCGGTC AGTGGAACGA TGCCATTGCA AAGACAAAAT ACCTGATGGA CTCTTTGGAA GAAGAAGAAG AAATTAAGCT CGAAATGGTC AACATGGGCG GAGGTTTCCC CGCTTCTTAT GTTACACCTG CAAACGACCT AAGCGAGTAT GCTTCCGAAA TTAGCCGCTA CTTGGAAGAT GATTTCGGTG AAGAGCGTCC GCGCATTATT TTGGAACCGG GCCGCTCCCT TGTAGGCGAC AGCGGTATCT TGGTAACCGA GGTTGTTATG ATTTCGCGCA AAAACAACAC AGCCCTCTTT AGATGGGTAT ATCTTGATAC GGGTCTTTTT AACGGTCTTA TTGAAACCCT AAACGAATCC TTAAAATACC CGATCATTAC CGATAAGGAT GAAGGCTGCA AAAAATGGGG TGAGGTCGTT TTGGCCGGTC CTACATGCGA CAGTATGGAT ATTATGTATG AAGATTATAA GTACAGTCTT CCTACCAACC TTAAGCCCGG AGACAGGGTA TACTTCCTTA CAACCGGTGC TTATACATCC AGTTATGCTT CTGTAGAGTT TAACGGCTTC CCGCCGATTA AAACCTACAT AATGAAGTAA
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Protein sequence | MERKDYISDS EWKHFMSFSE NLETPCVVIN LKTIKKNYQK LRENFPYADI FYAIKANPHE EIISMLNEMG SCFDIASRYE LDKVLKLGVS PERLSYGNTI KKAKDIAYFY EKGVRMFATD SKDDLKNIAQ FAPGSRVYVR ILVENTTSAD WPLSRKFGCH PDMAYDLCIQ ARDSGLIPYG ISFHVGSQQR DIGQWNDAIA KTKYLMDSLE EEEEIKLEMV NMGGGFPASY VTPANDLSEY ASEISRYLED DFGEERPRII LEPGRSLVGD SGILVTEVVM ISRKNNTALF RWVYLDTGLF NGLIETLNES LKYPIITDKD EGCKKWGEVV LAGPTCDSMD IMYEDYKYSL PTNLKPGDRV YFLTTGAYTS SYASVEFNGF PPIKTYIMK
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