Gene TDE1095 details

Gene Information

• Locus tag: TDE1095
• Symbol: alr
• ID: 2740225
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1129966
• End bp: 1131105
• Gene Length: 1140 bp
• Protein Length: 379 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637159969
• Product: alanine racemase
• Protein accession: NP_971703
• Protein GI: 42526605
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0787] Alanine racemase
• TIGRFAM ID: [TIGR00492] alanine racemase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.885061
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAGCGA CAAAGGCTAT TATCCATTTG GATAACTTAC AATATAACAT TAAAGAAATA 
AAAAAGCGGC TTAACAAGAA TGTAAAGATT TGTCTTCCGG TCAAGGCCGA TGCCTATGGG 
CATGGGGCTG TGAGGGTTGC GGTTGCAGCA ATAAGGGCAG GCGTTTCTTA TTTGGCTGTT 
GCCTCCATTC AGGAAGCTGT CGAATTAAGA GAGGCCGGTA TTGTAGCCCC GATTATTTCT 
TTAAGTCTTC CCGTGCTTGA AGAAATTCCT GAGCTTTTAA AATACGATAT TGAGCCCTTG 
GTTATAGATG AGGAGTTTAT AAACGATTTA AACCGTTTTG CAAAAAAACT AAATAAAAAA 
GCCTGGGTTC ATCTTAAAAT AGATACCGGA ATGCGCAGGA TAGGCTGCTC GCCTATGGAA 
GCCGTTAAAC TTGCGGTACA GATAGACCGT GCAGAAAATC TTGAGCTAAA AGGAGTGTGT 
ACGCATTTCG CTGTTTCCGA TTCTACCGAT GAAAAAAATA TTAAATTTAC AAAAAAACAG 
ATTTCTGTTT TTAAGGACTC AATAAAAGAA ATAAAAAAAG CGGGGATTAA TCCCGGATTA 
ATTCATGCCG CAAATTCAGG ATCTGTTCTT CAATATCCCG AAGCCCAGTT CGATATGGTG 
CGTCCGGGAA TCTTGGTCTA CGGTTATGCA CCCTCTCCAT CCCTAAATTC TTTAATAGAT 
TTAAAGCCTG TAATGGAGCT TGTTACACAG GTAGTGCTTA TCAAAAAAAT TGAAAAGGAT 
ACAAGCGTTT CTTATGATAG ATGTTGGACA GCCGAAAAAG AAACATTTGT TGCAACCCTT 
CCTATAGGCT ATGCGGACGG ACTCATGCGT TCCCTTAGCG GATTAAAAGT GAGAATAGGA 
AAAGATTTTT TTCCGATCAT CGGACGCATT TGTATGGATC AATGTATGAT AGATATAGGC 
GCTTCTCCAT GGGTTCAAAG ATGGGATGAG GTTTGTATCT TCGGTCCTGT TTCAAAAGAA 
CATCCTAAAA ATAATACGGC CCAAGATCTT GCAAAAATTG CCGGAACTAT TCCTTATGAG 
CTGACATGCG ATATAAACAA AAGAGTTCCG CGTATTTTTA TTGATGAAAC CATACAATAA 

 

Protein sequence

MRATKAIIHL DNLQYNIKEI KKRLNKNVKI CLPVKADAYG HGAVRVAVAA IRAGVSYLAV 
ASIQEAVELR EAGIVAPIIS LSLPVLEEIP ELLKYDIEPL VIDEEFINDL NRFAKKLNKK 
AWVHLKIDTG MRRIGCSPME AVKLAVQIDR AENLELKGVC THFAVSDSTD EKNIKFTKKQ 
ISVFKDSIKE IKKAGINPGL IHAANSGSVL QYPEAQFDMV RPGILVYGYA PSPSLNSLID 
LKPVMELVTQ VVLIKKIEKD TSVSYDRCWT AEKETFVATL PIGYADGLMR SLSGLKVRIG 
KDFFPIIGRI CMDQCMIDIG ASPWVQRWDE VCIFGPVSKE HPKNNTAQDL AKIAGTIPYE 
LTCDINKRVP RIFIDETIQ