Gene TDE1075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1075 
Symbol 
ID2739087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand+ 
Start bp1106102 
End bp1107079 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content44% 
IMG OID637159949 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein 
Protein accessionNP_971683 
Protein GI42526585 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATA AAGAAGTAGT TCTTGATGTA AAAAACTTGA GATTGTACTA TCACACCTCC 
GCAGGTATTG TAAAAGCCTT GGATGATGTG AGTTTTACTC TTCATGCCGG CGAAACGCTG 
GGTCTTGTAG GAGAATCCGG TTGCGGTAAA ACGACTACAG GTATGGCTCT GCTTAAGATG 
CCCTCTCCTC CCGGAAGAGT AGAGGAGAAT TCTCAGATTA TAATCAATGG AAGGGACATT 
GTTCCCCTCT CCGATTCAGA GATAAGAAAA AATGTACGCT GGCAGGAAAT TTCGATGGTC 
TTCCAAGGAG CTATGAACAG TTTAACTCCG GTTTACACAA TCGGGAAACA GATGCTTGAA 
ACATTGAGGG AACACAAGGA AATGAGCGAT AAAGAAGCTC AAGACCTCAT GGAAGAGTAT 
CTGGGCTATG TCGGCCTTCC GCCCGAAGTT TTAAACCGCT ATCCCCACGA GCTTTCAGGA 
GGAATGAAGC AGAGGGTTGT TATAGCAAGC GGCCTATTCT TAAAACCTAA ACTCGTTATT 
CTGGATGAAC CCACCACTGC CCTCGATGTT ATTGTTCAAG CTCAGATTAT AAACCTTTTA 
AAGGAACTAA AAAAGAAATT TAAGCTTTCC TTTATATTTA TTACCCACGA TCTGTCGCTT 
GAAGCCGAAA TTTCGGATAG GATTTGTGTT ATGTATGCGG GAAAAATTGC CGAGCTCGGA 
ACCAATGAGC AGATATACGG TAAGGAGCCC CTGCACCCAT ATACCCAAAA ACTTTTACAG 
GCAACACCTC TTTTAAGAAA GAGGGTGAGC GAGCTTTCCT ATATTCCGGG AACGCCGCCC 
GACCTTATTT CTCCGCCCAA GGGCTGCCGC TTTAATCCGA GGTGTCATTG TACAATGGAT 
AAGTGCTTCG AAGTTGAGCC TCCTCTTATA GAGGTTGAAC CGGGACATCA AGTAGCATGC 
TGGAGGTGTG TAAAATGA
 
Protein sequence
MENKEVVLDV KNLRLYYHTS AGIVKALDDV SFTLHAGETL GLVGESGCGK TTTGMALLKM 
PSPPGRVEEN SQIIINGRDI VPLSDSEIRK NVRWQEISMV FQGAMNSLTP VYTIGKQMLE 
TLREHKEMSD KEAQDLMEEY LGYVGLPPEV LNRYPHELSG GMKQRVVIAS GLFLKPKLVI 
LDEPTTALDV IVQAQIINLL KELKKKFKLS FIFITHDLSL EAEISDRICV MYAGKIAELG 
TNEQIYGKEP LHPYTQKLLQ ATPLLRKRVS ELSYIPGTPP DLISPPKGCR FNPRCHCTMD 
KCFEVEPPLI EVEPGHQVAC WRCVK