| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TDE1072 |
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| Symbol | |
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| ID | 2740833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Treponema denticola ATCC 35405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002967 |
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| Strand | + |
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| Start bp | 1100881 |
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| End bp | 1103496 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637159946 |
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| Product | putative lipoprotein |
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| Protein accession | NP_971680 |
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| Protein GI | 42526582 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3889] Predicted solute binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000214841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGTT TTGTTAAGTT TTTAGCATGT ATGCTTGCAG TGGCTTTGGT ATTTACTGCA
TGCGGAGGCG GTGCCGGAAC TGCCGCAGGA GGCAAAAGCC CTGTAAAGAA CGGTACCTAT
GTAGATAAGG TTATCTACTC CGTAAGTACC GATCAGACCG TTGCCTTAAA AGATGTTATT
GAGGGAAAGG TAGACCTTAT GTTTACCTCT GTTCCGCCCG TACTTTTGTC GGGTTTGAGC
GATGAAGACA GAGATAAGAT AGATGTTTAT CCTGTTCCTA CAGGTTATTG GTCTCTTCTA
TTTAACCCTA TCCCCAACAA GGCTCCCTAT GTTTGGAAGA CGGAAGCCGG AGAGGAAATG
TTTAACCCCG TTGCCATCAA GGAAGTCCGC TATGCCTTTA ACTGGTTAAT CAACCGAAAA
AAATTGGTAG ATGAACTCCT TTTAGGTGAA GGTTCTCCTA TGTATACGCC ATGTACCGTA
GGTCTTCCCG GAGCATACCG CTATAATATC TTGGCTTCCA AATTCGGTAT CACCGAAACC
GGAGATGAGC AAAAAGCTAT CAGCATGATT GAAAATGCTA TGCAAAAGGC TTCTCAACTT
GCCGAAAACA AGGGAAAACT TGTAAAAGAA AACGGAAAGT GGATGTACAA GGGCAAGCCC
GTTACAATCA AGTCCATAAT GCGTGTTGAC GATCCTACAG GCCGTCTTCC TGCAGCCCGC
TATATTCATG CTCAAATCGA AAAAGCCGGT CTTACGGTTG AAGGTTTTGA ACGAGATAGA
AAAACAGCCG GAAGTCTTGT TTACGGCGGA AACCCTGCCA ACTATGATTG GACCATGTAC
CTTGAAGGAT GGGGTTCAGG CGGTTTCTAT GTAACATGGG AAACTCCTCT TTGCCAGATG
TACAGCCCCT TCTACGGCTA CATGCCGGGA GGCGGAGAGG CCGAATTCTG GAATTATTCA
AACGAAAAAT TAGATGTTTT AGGTAAAAAG GCTGCCTACG GACAGTATTT GACTGCCGAA
GAATTCTTTA GCGAAACAAC CGATATGTGT GCTATAGGAA TGGGAGAAGC TGTCCGTGTT
TATGTTGTTT CTCAAAACGA TTTATATGTA GCCAACAGAG GAAGATTTAA TTCACGTCTT
TTCTATGGAA CCTCTGACGG CTTTAACGGC TGGACCGTAA GATGTGCCGA TGTTAAGCCC
GATACAGACG GCCCCTATAA AGGAAAGAGG GTCTTGCGTG TATTGCAGTA TTCAGCTCAA
GGCTCCTTAT TTATGTCTGA ATGGGATCCT GTAGGCGGAC AGGGCTTTAG TGATGCCTAT
AGTACTGCCT TTTTTAATGC CGTTACCGAT AGAGCTTCCT TTGATAACCC TGCCGTAGGA
CGATTGGAAT TTGCTATGTC AACGGTTGAT GTTGCAAATA CAAAATTCGC TCCCAAATTC
GTACCCACAG GCAACAAGAC AGAGGAAGGC GATGATGAAC TTGCAATGGG CGGTGATATT
CCCGTTCCTG CAGAAGCCGT TATGTATGAC ACAGCTTCAA AAAAATGGGT TCCTGCCGAG
TCAGGTCAAA GTGTTGCAAC TGTTGCAACG GGTAAGCTCG TAGACGGTTA TTACTGGCAT
CACGGCGAAC CTGTCGATCT TAACGATGTC AGGTATGCCT TTGCCTTTGC TTATGAGTGG
GCTATTCAAG ACGGAGAGGG AGACCTCTAC TATGATGCTC CTTTAAGCAG TGTAACTCTT
CCAAGTCTTA AAACCACAAA AGGTATAGTA TTTAATAAGG ATGGATCCAT AACTACATAC
AGTAACTACT TCCATGCTCC TATCCCAAGA GATACAGCTA TAACTGTAGG CGGTTTAAGC
GTAAAGGCTG CTAACCCCGG ACGACGAACA AATGTACCTT GGGAAATTTA TGAAGCCTTG
GCAGAAATGG TAGTACACGG CTCAAAGAGC GGAACGGTTT ATAACTTTGC TAAAGACGGC
GGAGAGCGCG GTGTAGAAGC AAATGTTAAA AACCCCGATT GTCTTGCAGA TATCAAGGCT
AAATTGGAAG ATTTTGTTGC TTCAAAGCAT ATTCCTGTGT CTTTAAAGGA TTTTATAAAT
GAAGATTACG CCATTAAGAG ATACAAGGCT TCTATAGCCT TTATCGAAAA ATACGGAAAT
GCTTATATTA CAACAGGTCC TTTAATGTTC GAAAAAATAG ATCCTGTTAC AAGCTCCGTC
GTATTGGCTA ACTTCGATAA GTATCCTTAT AAGAGCGACT ACTTCCCGAA TATGTTTAAA
ACAGATCTTA CTGAGATTCA GTATGTCAAG GCTCCTGTAG CTCCTTCGGC AGACAAGGAT
GCCGTATTTG AGGTAACCGT TTCCAAGTAT GCTTATCCTG AGGTTGAAAG AGTCCCTCTC
GATAAGGGAA AGGTTGAAGG ACGTCTCCAG CTTCCTTCAG GCGGAGAGAA GACTTATGAT
GCTAAAGCAA TAGGTGACGG TAAATTCACT ATTACCGTAC CTGCATCAGA CTTAGCCGGA
CTTGAAAAAG GCGTGGAATA TATAATGGTT GTATTAACCT CAATTTCCGA TGAGCCGCCC
TCAGCAAATT CGGTAAGCTT TACAATTCTT AAATAG
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| Protein sequence | MKSFVKFLAC MLAVALVFTA CGGGAGTAAG GKSPVKNGTY VDKVIYSVST DQTVALKDVI
EGKVDLMFTS VPPVLLSGLS DEDRDKIDVY PVPTGYWSLL FNPIPNKAPY VWKTEAGEEM
FNPVAIKEVR YAFNWLINRK KLVDELLLGE GSPMYTPCTV GLPGAYRYNI LASKFGITET
GDEQKAISMI ENAMQKASQL AENKGKLVKE NGKWMYKGKP VTIKSIMRVD DPTGRLPAAR
YIHAQIEKAG LTVEGFERDR KTAGSLVYGG NPANYDWTMY LEGWGSGGFY VTWETPLCQM
YSPFYGYMPG GGEAEFWNYS NEKLDVLGKK AAYGQYLTAE EFFSETTDMC AIGMGEAVRV
YVVSQNDLYV ANRGRFNSRL FYGTSDGFNG WTVRCADVKP DTDGPYKGKR VLRVLQYSAQ
GSLFMSEWDP VGGQGFSDAY STAFFNAVTD RASFDNPAVG RLEFAMSTVD VANTKFAPKF
VPTGNKTEEG DDELAMGGDI PVPAEAVMYD TASKKWVPAE SGQSVATVAT GKLVDGYYWH
HGEPVDLNDV RYAFAFAYEW AIQDGEGDLY YDAPLSSVTL PSLKTTKGIV FNKDGSITTY
SNYFHAPIPR DTAITVGGLS VKAANPGRRT NVPWEIYEAL AEMVVHGSKS GTVYNFAKDG
GERGVEANVK NPDCLADIKA KLEDFVASKH IPVSLKDFIN EDYAIKRYKA SIAFIEKYGN
AYITTGPLMF EKIDPVTSSV VLANFDKYPY KSDYFPNMFK TDLTEIQYVK APVAPSADKD
AVFEVTVSKY AYPEVERVPL DKGKVEGRLQ LPSGGEKTYD AKAIGDGKFT ITVPASDLAG
LEKGVEYIMV VLTSISDEPP SANSVSFTIL K
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