Gene TDE1068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE1068 
Symbol 
ID2740829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand- 
Start bp1095784 
End bp1096776 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content42% 
IMG OID637159942 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein 
Protein accessionNP_971676 
Protein GI42526578 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATC CTCTACTTGA AGTTAAAAAT TTACATACAT ACTTTTTTAC AAACAAGGGA 
ACAATAAAAG CCGTTCAAGG TGTAGATTTT ACAATCGAAG CCGGTAAAAC TTTGGGAATA 
GTAGGAGAGT CAGGCTCAGG TAAATCCATC ACAGCCTTTA GTATTCTCAA CCTTCTCGAA 
TATCCGGGCA AAATTGTCCA AGGAGAAATA AATTTCGGCG GAATAAACCT TGTAAATTTA 
GGCAAAAAGG AAATAAGAAA GATAAGGGGT AACGATATAT CGATGATATT CCAAGAGCCC 
ATGACCTCTC TTAACCCCGT TCACAGAATA GGAAGACAGC TAAGCGAGCC CTTAATTCTT 
CATCAGCACA TGTCAAAAAA AGAAGCATGG GCTGCCGCCA TCGACCTTTT ACGCGAAGTA 
AAAATCCCTA ATCCGGAAAA CGTAGTTTAT AATTACCCCT TCCAGCTTTC GGGCGGAATG 
AGGCAGCGTG TAATGATTGC TATGGCCTTG GCTTGCAAGC CTCGTCTTTT GATAGCCGAT 
GAGCCTACAA CGGCCCTTGA TGTTACAATA CAGGCACAGA TCTTTAAGTT GATGAACGAT 
TTAAAGAAAA AGCACAACAC GGCAATCATG TTTATCACCC ACGACTTGGG TGCCATTGCA 
GAATTGGCCG ATGATGTAGC CGTAATGTAC ACGGGAGAAA TCGTTGAAAG GGCTCCGGTA 
GACGTTATCT TTGACCGACA GACTCAATTC TCTCATCCTT ATAAGGAAGG CTTGCTTGAA 
TCAATCCCCC TCTTGGATGA AGAAGTAGAA TATCTCGCTC AAATTCAAGG AAGTGTACCT 
CATCCTCTTA AACTTCCCAA GGGTTGCAGA TTTTCGACAA GGTGCGAGTA TGCAACCGAA 
AAATGCCGAA ACGAAAAGCC CGAATTGGTT GAAGTAGAAG AAGGACACTT AATCAGATGC 
TTTTATCCGA AATCAGGAGG TAGACATGAG TAA
 
Protein sequence
MKNPLLEVKN LHTYFFTNKG TIKAVQGVDF TIEAGKTLGI VGESGSGKSI TAFSILNLLE 
YPGKIVQGEI NFGGINLVNL GKKEIRKIRG NDISMIFQEP MTSLNPVHRI GRQLSEPLIL 
HQHMSKKEAW AAAIDLLREV KIPNPENVVY NYPFQLSGGM RQRVMIAMAL ACKPRLLIAD 
EPTTALDVTI QAQIFKLMND LKKKHNTAIM FITHDLGAIA ELADDVAVMY TGEIVERAPV 
DVIFDRQTQF SHPYKEGLLE SIPLLDEEVE YLAQIQGSVP HPLKLPKGCR FSTRCEYATE 
KCRNEKPELV EVEEGHLIRC FYPKSGGRHE