Gene TDE1048 details

Gene Information

• Locus tag: TDE1048
• Symbol: rpsG
• ID: 2741322
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1074622
• End bp: 1075092
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637159921
• Product: 30S ribosomal protein S7
• Protein accession: NP_971656
• Protein GI: 42526558
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0049] Ribosomal protein S7
• TIGRFAM ID: [TIGR01029] ribosomal protein S7, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.000000242991
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTAGAG GAAAAATTAC TGCAAGACGC CCTGTTGCTC CCGACAGCAA GTACAATAGC 
GTGGTAGTTA CCCGCTTTAT CGGAAGAATG ATGCTTTCAG GAAAAAAGAG CATTACTACA 
AAGATCATGT ACGATTCTTT TGATAAAATC AAGGAAAAGA CCGGCGAAGA GCCATTGGCC 
GTTTTTTCAA AGGCCTTGGA CAACGTAAAA CCCGTTGTTG AAGTAAAATC CCGCCGAGTC 
GGAGGTGCCA CCTATCAGGT TCCGATGGAC ATTCCGGAGG GAAGGCGAGA AGCCTTGGCT 
ATGCGCTGGA TTATCGGTGC TGCTCGAAAA AGAAGCGGTC ATGAGATGTC CGAAAGATTG 
GCTTCAGAGC TGATCGATGC ATACAACAAC ACCGGAACAG CCTTCAAAAA GAAGGAAGAA 
GTTCACAGAA TGGCCGAAGC AAACAAAGCT TTTGCACACT TCAGGTGGTA G 

 

Protein sequence

MGRGKITARR PVAPDSKYNS VVVTRFIGRM MLSGKKSITT KIMYDSFDKI KEKTGEEPLA 
VFSKALDNVK PVVEVKSRRV GGATYQVPMD IPEGRREALA MRWIIGAARK RSGHEMSERL 
ASELIDAYNN TGTAFKKKEE VHRMAEANKA FAHFRW