Gene TDE1042 details

Gene Information

• Locus tag: TDE1042
• Symbol: dut
• ID: 2741316
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Treponema denticola ATCC 35405
• Kingdom: Bacteria
• Replicon accession: NC_002967
• Strand: +
• Start bp: 1070632
• End bp: 1071066
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637159915
• Product: deoxyuridine 5'triphosphate nucleotidohydrolase
• Protein accession: NP_971650
• Protein GI: 42526552
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0756] dUTPase
• TIGRFAM ID: [TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut)

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00593592
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAGTTT TTACAAAGTT AAAAGAGGGT GCCCTTTTAC CGGAATACAA AACGAGCGGA 
TCTGCCGGAG CGGATTTGCG GGCCCTTATT GAAGAACCTA TTATCTTAAA ACCCATGCAA 
AGATGCTTAA TTCCTACAGG CCTTTCGGTT GAATTACCTA AGGGAATTGA GCTTCAAGTG 
CGTCCCCGAT CGGGGCTTGC CCTAAAACAC GGCATTACCG TCTTAAACAC TCCCGGCACT 
GTAGATTCGG ACTACCGCGG AGAACTCGCC GTTCTTTTAA TAAATCTCGG AAATGAAGAC 
TTTAAAATAG AAAACGGGGA CCGCATCGCC CAAGCCGTTA TTGCCCAAGC TATTCAGGCT 
GATTTTCTTC AAAAGGATGA GCTTTCCAAT ACCGAACGCG GAGCAGGGGG CTACGGTTCT 
ACGGGAATAG CATGA 

 

Protein sequence

MEVFTKLKEG ALLPEYKTSG SAGADLRALI EEPIILKPMQ RCLIPTGLSV ELPKGIELQV 
RPRSGLALKH GITVLNTPGT VDSDYRGELA VLLINLGNED FKIENGDRIA QAVIAQAIQA 
DFLQKDELSN TERGAGGYGS TGIA